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PlantUML is an open-source tool allowing users to create diagrams from a plain text language. Besides various UML diagrams, PlantUML has support for various other software development related formats (such as Archimate, Block diagram, BPMN, C4, Computer network diagram, ERD, Gantt chart, Mind map, and WBD), as well as visualisation of JSON and YAML files.
A workflow management system used for building and running scalable and reproducible bioinformatics pipelines, especially in cloud and high-performance computing environments. Linux, macOS, Windows: Apache License 2.0 Nextflow Team [6] PathVisio: Desktop software for drawing, analyzing, and visualizing biological pathways Linux, macOS, Windows ...
UML v1 Yes [47] Unknown Yes [48] Unknown Software Ideas Modeler: Yes Yes Unknown Yes Yes No Unknown System Architect: Yes Yes Unknown No Yes Yes DOORS, RTC, UNICOM Focal Point, Rhapsody System Architecture Modeler: Yes SysML v2 No Yes No No DOORS,Codebeamer, Ansys medini, Ansys Scade One, Ansys ModelCenter UModel: Yes Partial Un ...
Mind Mapping, ER Diagram, DFD, Flowchart, CRUD, Traceability Map, Requirement Diagram and Requirement table. Provides API and Plugins, RTF, HTML Export. ATL: Yes No Yes No Unknown Unknown Available from the Eclipse M2M project (Model to Model). Can transform UML & EMF models into other models.
UML Diagrams used to represent the development view include the Package diagram and the Component diagram. [2] Physical view: The physical view (aka the deployment view) depicts the system from a system engineer's point of view. It is concerned with the topology of software components on the physical layer as well as the physical connections ...
Pathway resources and types of pathway analysis using databases like KEGG, Reactome and WikiPathways. [1]Pathway is the term from molecular biology for a curated schematic representation of a well characterized segment of the molecular physiological machinery, such as a metabolic pathway describing an enzymatic process within a cell or tissue or a signaling pathway model representing a ...
A deployment diagram [1] "specifies constructs that can be used to define the execution architecture of systems and the assignment of software artifacts to system elements." [1] To describe a web site, for example, a deployment diagram would show what hardware components ("nodes") exist (e.g., a web server, an application server, and a database server), what software components ("artifacts ...
MagicDraw provides transformation of UML models to specific XML Schema and DB models (generic and Oracle DDL) and vice versa, and any to any transformation. [ 5 ] Also model-to-model transformations between the same or different meta-models can be defined and run directly in MagicDraw by using the QVT plugin.