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The results can be displayed on-line, or they can be downloaded to the user's computer in a wide variety of export formats. The Virtual Cell license allows free access to all members of the scientific community. [6] Users may save their models in the VCell DataBase, which is maintained on servers at U. Connecticut.
AutoDock is a molecular modeling simulation software. It is especially effective for protein-ligand docking. AutoDock 4 is available under the GNU General Public License. AutoDock is one of the most cited docking software applications in the research community. [1]
Windows, macOS: GPL: Collaborative project GenoCAD: A computer-assisted design (CAD) tool for synthetic biology, used to design genetic constructs based on grammar rules. Linux, macOS, Windows: Apache License 2.0 GenoCAD Team (Virginia Bioinformatics Institute) Genomespace
One of the first PC-based systems biology simulators: BBC Micro: No: 1986 MetaModel [73] Early PC-based systems biology simulator: Turbo Pascal 5.0: No: 1991 MIST [74] GUI based simulator: Borland Pascal 7.0: No: 1995 SCAMP [75] First application to support metabolic control analysis and simulation on a PC: Pascal, later in C: No: 1985 (Thesis)
Free open source: ms-2.de: OpenMM: No No Yes Yes Yes Yes No Yes Yes High Performance MD, highly flexible, Python scriptable Free open source MIT: OpenMM: Orac: No No Yes Yes No Yes No Yes No Molecular dynamics simulation program to explore free energy surfaces in biomolecular systems at the atomic level Free open source: Orac download page ...
Unreal Engine - immersive virtual-reality training simulation software. Vensim - system dynamics and continuous simulation software for business and public policy applications. VisSim - system simulation and optional C-code generation of electrical, process, control, bio-medical, mechanical and UML State chart systems.
This is a list of free and open-source software (FOSS) packages, computer software licensed under free software licenses and open-source licenses. Software that fits the Free Software Definition may be more appropriately called free software ; the GNU project in particular objects to their works being referred to as open-source . [ 1 ]
This is a category of articles relating to software which can be freely used, copied, studied, modified, and redistributed by everyone that obtains a copy: "free software" or "open source software". Typically, this means software which is distributed with a free software license , and whose source code is available to anyone who receives a copy ...