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A consensus logo is a simplified variation of a sequence logo that can be embedded in text format. Like a sequence logo, a consensus logo is created from a collection of aligned protein or DNA/RNA sequences and conveys information about the conservation of each position of a sequence motif or sequence alignment [1] [4].
The first column contains a number for each chromopsin group for easy reference. The second column shows the names for each group. The third contains the number of sequences in each group. And the fourth column contains the sequence logo, the height of the letters indicates the percentage of that amino acid given at that position.
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PWMs are often represented graphically as sequence logos.. A position weight matrix (PWM), also known as a position-specific weight matrix (PSWM) or position-specific scoring matrix (PSSM), is a commonly used representation of motifs (patterns) in biological sequences.
The fourth is a great example of how interactive graphical tools enable a worker involved in sequence analysis to conveniently execute a variety if different computational tools to explore an alignment's phylogenetic implications; or, to predict the structure and functional properties of a specific sequence, e.g., comparative modelling.
Company logos may appear in articles on those companies, but note that, if challenged, it is the responsibility of those who wish to include the logo to prove that its use meets Wikipedia non-free content criteria. Logos uploaded to Wikipedia must be low-resolution and no larger than necessary.
During uploading on Wikimedia Commons, use {{PD-textlogo}} as the 'license' if the logo is simple enough. Otherwise, upload it to Wikipedia as non-free but fair use material. Otherwise, upload it to Wikipedia as non-free but fair use material.
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