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The Plant Genome Mapping Laboratory (PGML) [1] is a department of the University of Georgia, directed by Dr. Andrew H. Paterson.Research focuses on the study of major crop species such as sorghum and cotton, as well as other species such as Bermuda Grass, Brassica and Peanut.
Genome size Number of genes predicted Organization Year of completion Assembly status Beta vulgaris (sugar beet) Chenopodiaceae: Crop plant: 714–758 Mbp: 27,421: 2013 [38] Chenopodium quinoa: Chenopodiaceae: Crop plant 1.39–1.50 Gb 44,776 2017 [39] 3,486 scaffolds, scaffold N50 of 3.84 Mb, 90% of the assembled genome is contained in 439 ...
Many plant species (especially agriculturally manipulated ones) [29] are known to have undergone large genome-wide changes through duplication of the whole genome. The rice and the wheat genomes, for example, can have 4-6 copies of whole genomes [ 29 ] ( wheat ) whereas animals typically only have 2 ( diploidy ).
It was the first plant genome to be sequenced, completed in 2000 by the Arabidopsis Genome Initiative. [39] The most up-to-date version of the A. thaliana genome is maintained by the Arabidopsis Information Resource. [40] The genome encodes ~27,600 protein-coding genes and about 6,500 non-coding genes. [41]
Association mapping, by contrast, takes advantage of historic recombination, and is performed by scanning a genome for SNPs in linkage disequilibrium with a trait of interest. Association mapping has advantages over linkage analysis in that it can map with high resolution and has high allelic richness, however, it also requires extensive ...
"Molecular Markers and Genetic Mapping". Oilseeds. Vol. 2 of Genome Mapping and Molecular Breeding in Plants. Springer. p. 88. ISBN 978-3540343875. Li, G.; Quiros, C. F. (2001). "Sequence Related Amplified Polymorphism (SRAP) A New Marker System Based on a Simple PCR Reaction: Its Application to Mapping and Gene Tagging in Brassica".
Plant physiology laboratory. From 1984 to December 2006: research director at the CNRS University of Perpignan. Plant Physiology Laboratory – Oct. 1984, in charge of the unit. From 1991 to 1995 and from 1999 to 2003: Head of the European Laboratory for Cellular and Molecular Biology of Plants CNRS-UP-CSIC, Perpignan-Barcelona.
Bennett, M.D. and I.J. Leitch. 2005. Genome size evolution in plants. In The Evolution of the Genome, edited by T.R. Gregory. San Diego: Elsevier. Pages 89–162. Gregory, T.R. 2005. The C-value enigma in plants and animals: a review of parallels and an appeal for partnership. Annals of Botany 95: 133–146.
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