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Software suite to search and cluster huge sequence sets. Similar sensitivity to BLAST and PSI-BLAST but orders of magnitude faster: Protein: Steinegger M, Mirdita M, Galiez C, Söding J [10] 2017 USEARCH Ultra-fast sequence analysis tool: Both: Edgar, R. C. (2010). "Search and clustering orders of magnitude faster than BLAST". Bioinformatics.
List of proprietary bioinformatics software; List of open-source bioinformatics software; Alternatively, here is a categorization according to the respective bioinformatics subfield specialized on: Sequence analysis software. List of sequence alignment software; List of alignment visualization software; Alignment-free sequence analysis
Chipster is a user-friendly analysis software for high-throughput data. It contains over 350 analysis tools for next generation sequencing (NGS), microarray, proteomics and sequence data. Users can save and share automatic analysis workflows, and visualize data interactively using a built-in genome browser and many other visualizations.
Seeq Corporation is a software company founded in 2013 and headquartered in Seattle, Washington, United States. [1] The company creates analytics software for various industrial process manufacturing sectors, including pharmaceuticals, oil and gas, mining, pulp and paper, energy, utilities, IIoT, and chemicals.
Polony sequencing is generally performed on paired-end tags library that each molecule of DNA template is of 135 bp in length with two 17–18 bp paired genomic tags separated and flanked by common sequences. The current read length of this technique is 26 bases per amplicon and 13 bases per tag, leaving a gap of 4–5 bases in each tag.
Open iT Analyzer for ANSYS Software helps ANSYS users manage their resources investment and ensures maximum utilization and ROI of these valuable assets. It provides a rich set of enterprise-wide software usage reports and powerful real-time views of current usage so managers can easily see how their IT assets are being used across the ...
Following digestion, the reaction is stopped and the entire digest run in a 2-3% agarose gel at 90-100 V. The gel should be of a length that would allow proper resolution of minor fragments, as small as 100–200 bp. Analysis of the patterns is done with methods used for RAPD patterns.
It is compatible with both Windows and Macintosh operating systems. The software has hardware settings control, performs analysis in real-time and offline without the loss of raw data, procedure automation via editable macros, and multiple block samplings for the recording and settings of different signals within one file. [5]