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  2. Single-cell sequencing - Wikipedia

    en.wikipedia.org/wiki/Single-cell_sequencing

    Single-cell RNA sequencing workflow. Current scRNA-seq protocols involve isolating single cells and their RNA, and then following the same steps as bulk RNA-seq: reverse transcription (RT), amplification, library generation and sequencing. Early methods separated individual cells into separate wells; more recent methods encapsulate individual ...

  3. RNA-Seq - Wikipedia

    en.wikipedia.org/wiki/RNA-Seq

    RNA-Seq can also be used to determine exon/intron boundaries and verify or amend previously annotated 5' and 3' gene boundaries. Recent advances in RNA-Seq include single cell sequencing, bulk RNA sequencing, [6] 3' mRNA-sequencing, in situ sequencing of fixed tissue, and native RNA molecule sequencing with single-molecule real-time sequencing. [7]

  4. Single-cell transcriptomics - Wikipedia

    en.wikipedia.org/wiki/Single-cell_transcriptomics

    RNA Seq Experiment. The single-cell RNA-seq technique converts a population of RNAs to a library of cDNA fragments. These fragments are sequenced by high-throughput next generation sequencing techniques and the reads are mapped back to the reference genome, providing a count of the number of reads associated with each gene. [13]

  5. Single-cell analysis - Wikipedia

    en.wikipedia.org/wiki/Single-cell_analysis

    This single cell shows the process of the central dogma of molecular biology, which are all steps researchers are interested to quantify (DNA, RNA, and Protein).. In cell biology, single-cell analysis and subcellular analysis [1] refer to the study of genomics, transcriptomics, proteomics, metabolomics, and cellcell interactions at the level of an individual cell, as opposed to more ...

  6. File:Single cell RNA-Seq workflow.pdf - Wikipedia

    en.wikipedia.org/wiki/File:Single_cell_RNA-Seq...

    You are free: to share – to copy, distribute and transmit the work; to remix – to adapt the work; Under the following conditions: attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made.

  7. CITE-Seq - Wikipedia

    en.wikipedia.org/wiki/CITE-Seq

    REAP-seq: Peterson et al. from Merck developed a technique similar to CITE-seq called RNA Expression and Protein Sequencing assay (REAP-seq). While REAP-seq, similarly to CITE-seq, measures levels of both transcripts and proteins in a single cell, the difference between the two techniques is how the antibody is conjugated to the oligonucleotides.

  8. File:RNA-Seq workflow-5.pdf - Wikipedia

    en.wikipedia.org/wiki/File:RNA-Seq_workflow-5.pdf

    You are free: to share – to copy, distribute and transmit the work; to remix – to adapt the work; Under the following conditions: attribution – You must give appropriate credit, provide a link to the license, and indicate if changes were made.

  9. Single-cell variability - Wikipedia

    en.wikipedia.org/wiki/Single-cell_variability

    Single-cell gene expression is typically assayed using RNA-seq. After the cell has been isolated, the RNA-seq protocol typically consists of three steps: [ 4 ] the RNA is reverse transcribed into cDNA , the cDNA is amplified to make more material available for the sequencer, and the cDNA is sequenced .