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Extensive data warehouse system for the analysis and integration of biological datasets written in Java and JavaScript Cross-platform: LGPL: University of Cambridge: LabKey Server: Software platform, allows organizations to integrate, analyze, and share complex biomedical data Linux, macOS, Windows: Apache: LabKey Software Foundation LAMMPS
The list of bioinformatics software tools can be split up according to the license used: List of proprietary bioinformatics software; List of open-source bioinformatics software; Alternatively, here is a categorization according to the respective bioinformatics subfield specialized on: Sequence analysis software. List of sequence alignment software
Orange, a data mining, machine learning, and bioinformatics software; Pandas – High-performance computing (HPC) data structures and data analysis tools for Python in Python and Cython (statsmodels, scikit-learn) Perl Data Language – Scientific computing with Perl; Ploticus – software for generating a variety of graphs from raw data
Anaconda is a distribution of the Python and R programming languages for scientific computing (data science, machine learning applications, large-scale data processing, predictive analytics, etc.), that aims to simplify package management and deployment. Anaconda distribution includes data-science packages suitable for Windows, Linux, and macOS ...
Waikato Environment for Knowledge Analysis (Weka) is a collection of machine learning and data analysis free software licensed under the GNU General Public License.It was developed at the University of Waikato, New Zealand and is the companion software to the book "Data Mining: Practical Machine Learning Tools and Techniques".
The Science of Science (Sci2) Tool is a modular toolset specifically designed for the study of science. It supports the temporal, geospatial, topical, and network analysis and visualization of datasets at the micro (individual), meso (local), and macro (global) levels. Users of the tool can: Access science datasets online or load their own.
Link library and tools that are a set of modular and extensible open-source, cross-platform tools and software libraries that facilitate proteomics data analysis. ProteoWorker: Proprietary: Cloud-based software for proteomics data analysis including COMET, Peptide Prophet, ProteinProphet and extensive data sorting, filtering and annotation tools.
Dbt enables analytics engineers to transform data in their warehouses by writing select statements, and turns these select statements into tables and views. Dbt does the transformation (T) in extract, load, transform (ELT) processes – it does not extract or load data, but is designed to be performant at transforming data already inside of a ...