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In particular, the pH of a solution can be predicted when the analytical concentration and pK a values of all acids and bases are known; conversely, it is possible to calculate the equilibrium concentration of the acids and bases in solution when the pH is known. These calculations find application in many different areas of chemistry, biology ...
FDPB-based methods calculate the change in the pK a value of an amino acid side chain when that side chain is moved from a hypothetical fully solvated state to its position in the protein. To perform such a calculation, one needs theoretical methods that can calculate the effect of the protein interior on a p K a value, and knowledge of the pKa ...
In chemistry and biochemistry, the Henderson–Hasselbalch equation = + ([] []) relates the pH of a chemical solution of a weak acid to the numerical value of the acid dissociation constant, K a, of acid and the ratio of the concentrations, [] [] of the acid and its conjugate base in an equilibrium.
The higher the proton affinity, the stronger the base and the weaker the conjugate acid in the gas phase.The (reportedly) strongest known base is the ortho-diethynylbenzene dianion (E pa = 1843 kJ/mol), [3] followed by the methanide anion (E pa = 1743 kJ/mol) and the hydride ion (E pa = 1675 kJ/mol), [4] making methane the weakest proton acid [5] in the gas phase, followed by dihydrogen.
The Gran plot is based on the Nernst equation which can be written as = + {+} where E is a measured electrode potential, E 0 is a standard electrode potential, s is the slope, ideally equal to RT/nF, and {H +} is the activity of the hydrogen ion.
where K ' is the dissociation constant of carbonic acid, which is equal to 800 nmol/L (since K ' = 10 −pKa H 2 CO 3 = 10 −(6.1) ≈ 8.00×10 −7 mol/L = 800 nmol/L). After multiplying the constants (800 × 0.03 = 24) and solving for HCO − 3, the equation is simplified to:
This equation can be used to calculate the value of log K at a temperature, T 2, knowing the value at temperature T 1. The van 't Hoff equation also shows that, for an exothermic reaction ( Δ H < 0 {\displaystyle \Delta H<0} ), when temperature increases K decreases and when temperature decreases K increases, in accordance with Le Chatelier's ...
In cell biology, protein kinase A (PKA) is a family of serine-threonine kinase [1] whose activity is dependent on cellular levels of cyclic AMP (cAMP). PKA is also known as cAMP-dependent protein kinase (EC 2.7.11.11). PKA has several functions in the cell, including regulation of glycogen, sugar, and lipid metabolism.