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We offer a wide range of comprehensive and seamless next-generation sequencing (NGS) data analysis solutions, including push-button tools for DNA sequence alignment, variant calling, and data visualization.
Browse a list of free open-source bioinformatics software tools for your next-generation sequencing data needs, developed by Illumina and hosted on Github for the genomics community.
Illumina offers a wide range of next-generation sequencing (NGS) data analysis software tools, including push-button tools for DNA sequence alignment, variant calling, and data visualization. Data generated on Illumina sequencing instruments are automatically transferred and stored securely in BaseSpace Sequence Hub.
DNA Sequencing Data Analysis. We offer intuitive bioinformatics tools to simplify DNA sequence alignment, variant calling, and data visualization, and provide ultra-rapid secondary analysis. RNA Sequencing Data Analysis
Sequencing Data Analysis. Our sequencers come equipped with primary data analysis tools built in. For secondary analysis, our bioinformatics tools align and assemble DNA and RNA fragments to fully sequence a sample so that genetic variants can be determined quickly and effectively. Learn More.
GenomeStudio Software offers efficient genotyping data normalization, genotype calling, clustering, data intensity analysis, loss of heterozygosity (LOH) calculation, and copy number variation (CNV) analysis.
GenomeStudio Software enables you to visualize and analyze microarray data generated on Illumina platforms. The software package is composed of discrete application modules that provide a comprehensive view of the genome and gene regulation.
Sequencing Analysis Viewer v2.5.12 Software for NextSeq 1000/2000. The software installer and release notes for SAV v2.5.12. View Options.
The Illumina® TruSightTM Oncology 500 ctDNA Local App analyzes sequencing reads of DNA libraries that are isolated from plasma and prepared using the DRAGEN TruSight Oncology 500 ctDNA assay. The software produces a variant call file (*.vcf) for small variants.
DNA Amplicon App. Streamlined analysis of NGS data enriched for particular target sequences using amplicon reads. 16S Metagenomics App. Analyzes DNA from amplicon sequencing of prokaryotic 16S small subunit rRNA genes and provides visuals of taxonomic classification.