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  2. VSEPR theory - Wikipedia

    en.wikipedia.org/wiki/VSEPR_theory

    Valence shell electron pair repulsion (VSEPR) theory (/ ˈ v ɛ s p ər, v ə ˈ s ɛ p ər / VESP-ər, [1]: 410 və-SEP-ər [2]) is a model used in chemistry to predict the geometry of individual molecules from the number of electron pairs surrounding their central atoms. [3]

  3. Triiodide - Wikipedia

    en.wikipedia.org/wiki/Triiodide

    The following exergonic equilibrium gives rise to the triiodide ion: . I 2 + I − ⇌ I − 3. In this reaction, iodide is viewed as a Lewis base, and the iodine is a Lewis acid.The process is analogous to the reaction of S 8 with sodium sulfide (which forms polysulfides) except that the higher polyiodides have branched structures.

  4. Molecular geometry - Wikipedia

    en.wikipedia.org/wiki/Molecular_geometry

    In accordance with the VSEPR (valence-shell electron pair repulsion theory), the bond angles between the electron bonds are arccos(− ⁠ 1 / 3 ⁠) = 109.47°. For example, methane (CH 4) is a tetrahedral molecule. Octahedral: Octa-signifies eight, and -hedral relates to a face of a solid, so "octahedral" means "having eight faces". The bond ...

  5. Square planar molecular geometry - Wikipedia

    en.wikipedia.org/wiki/Square_planar_molecular...

    Structure of cisplatin, an example of a molecule with the square planar coordination geometry. In chemistry, the square planar molecular geometry describes the stereochemistry (spatial arrangement of atoms) that is adopted by certain chemical compounds. As the name suggests, molecules of this geometry have their atoms positioned at the corners.

  6. Square antiprismatic molecular geometry - Wikipedia

    en.wikipedia.org/wiki/Square_antiprismatic...

    Square prismatic geometry (D 4h) is much less common compared to the square antiprism.An example of a molecular species with square prismatic geometry (a slightly flattened cube) is octafluoroprotactinate(V), [PaF 8] 3–, as found in its sodium salt, Na 3 PaF 8. [6]

  7. Template:Protein structural analysis - Wikipedia

    en.wikipedia.org/wiki/Template:Protein...

    A navigational box that can be placed at the bottom of articles. Template parameters [Edit template data] Parameter Description Type Status State state The initial visibility of the navbox Suggested values collapsed expanded autocollapse String suggested Template transclusions Transclusion maintenance Check completeness of transclusions The above documentation is transcluded from Template ...

  8. List of protein structure prediction software - Wikipedia

    en.wikipedia.org/wiki/List_of_protein_structure...

    Constituent amino-acids can be analyzed to predict secondary, tertiary and quaternary protein structure. This list of protein structure prediction software summarizes notable used software tools in protein structure prediction, including homology modeling, protein threading, ab initio methods, secondary structure prediction, and transmembrane helix and signal peptide prediction.

  9. RaptorX - Wikipedia

    en.wikipedia.org/wiki/RaptorX

    RaptorX is the successor to the RAPTOR protein structure prediction system. RAPTOR was designed and developed by Dr. Jinbo Xu and Dr. Ming Li at the University of Waterloo. RaptorX was designed and developed by a research group led by Prof. Jinbo Xu at the Toyota Technological Institute branch at Chicago.