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  2. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Collaborative project Galaxy: Scientific workflow and data integration system Unix-like: Academic Free: Collaborative project GenePattern: Scientific workflow system that provides access to hundreds of genomic analysis tools Unix-like (public server); Linux, macOS, Windows: MIT: Broad Institute, UC San Diego: Geworkbench: Genomic data ...

  3. Health informatics - Wikipedia

    en.wikipedia.org/wiki/Health_informatics

    An example of how the 2D Fourier transform can be used to remove unwanted information from an X-ray scan. The Faculty of Clinical Informatics has identified six high level domains of core competency for clinical informaticians: [7] Health and Wellbeing in Practice; Information Technologies and Systems; Working with Data and Analytical Methods

  4. Integrated Microbial Genomes System - Wikipedia

    en.wikipedia.org/wiki/Integrated_Microbial...

    The Integrated Microbial Genomes (IMG) system is a genome browsing and annotation platform developed by the U.S. Department of Energy (DOE)-Joint Genome Institute. [2] [3] IMG contains all the draft and complete microbial genomes sequenced by the DOE-JGI integrated with other publicly available genomes (including Archaea, Bacteria, Eukarya, Viruses and Plasmids).

  5. BioPerl - Wikipedia

    en.wikipedia.org/wiki/BioPerl

    BioPerl is an active open source software project supported by the Open Bioinformatics Foundation. The first set of Perl codes of BioPerl was created by Tim Hubbard and Jong Bhak [citation needed] at MRC Centre Cambridge, where the first genome sequencing was carried out by Fred Sanger. MRC Centre was one of the hubs and birthplaces of modern ...

  6. Integrated Genome Browser - Wikipedia

    en.wikipedia.org/wiki/Integrated_Genome_Browser

    Integrated Genome Browser (IGB) (pronounced Ig-Bee) [1] is an open-source genome browser, a visualization tool used to observe biologically-interesting patterns in genomic data sets, including sequence data, gene models, alignments, and data from DNA microarrays.

  7. Multiomics - Wikipedia

    en.wikipedia.org/wiki/Multiomics

    Number of citations of the terms "Multiomics" and "Multi-omics" in PubMed until the 31st December 2021. Multiomics, multi-omics, integrative omics, "panomics" or "pan-omics" is a biological analysis approach in which the data sets are multiple "omes", such as the genome, proteome, transcriptome, epigenome, metabolome, and microbiome (i.e., a meta-genome and/or meta-transcriptome, depending ...

  8. List of sequence alignment software - Wikipedia

    en.wikipedia.org/wiki/List_of_sequence_alignment...

    Indexes the genome with periodic seeds to quickly find alignments with full sensitivity up to four mismatches. It can map Illumina and SOLiD reads. Unlike most mapping programs, speed increases for longer read lengths. Yes Free, GPL [49] PRIMEX Indexes the genome with a k-mer lookup table with full sensitivity up to an adjustable number of ...

  9. ENCODE - Wikipedia

    en.wikipedia.org/wiki/ENCODE

    The Encyclopedia of DNA Elements (ENCODE) is a public research project which aims "to build a comprehensive parts list of functional elements in the human genome." [2]ENCODE also supports further biomedical research by "generating community resources of genomics data, software, tools and methods for genomics data analysis, and products resulting from data analyses and interpretations."