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Version 0.2 of October 2016, supports the algorithms BWA-MEM, BWA-backtrack, and BWA-ALN. All of them work with single-reads and paired-end reads. Yes Low quality bases trimming Yes Yes Free, GPL 3 [57] 2016 SSAHA, SSAHA2 Fast for a small number of variants Proprietary, freeware for academic and noncommercial use Stampy For Illumina reads.
A set of books extracted from the Project Gutenberg books library Text Natural Language Processing 2019 Jack W et al. Deepmind Mathematics: Mathematical question and answer pairs. Text Natural Language Processing 2018 [115] D Saxton et al. Anna's Archive: A comprehensive archive of published books and papers None 100,356,641 Text, epub, PDF
scikit-learn (formerly scikits.learn and also known as sklearn) is a free and open-source machine learning library for the Python programming language. [3] It features various classification, regression and clustering algorithms including support-vector machines, random forests, gradient boosting, k-means and DBSCAN, and is designed to interoperate with the Python numerical and scientific ...
Python (programming language) scientific libraries (36 P) Pages in category "Python (programming language) libraries" The following 43 pages are in this category, out of 43 total.
Pandas (styled as pandas) is a software library written for the Python programming language for data manipulation and analysis. In particular, it offers data structures and operations for manipulating numerical tables and time series. It is free software released under the three-clause BSD license. [2]
Construct, a python library for the declarative construction and deconstruction of data structures; Genshi, a template engine for XML-based vocabularies; IPython, a development shell both written in and designed for Python; Jinja, a Python-powered template engine, inspired by Django's template engine; Kid, simple template engine for XML-based ...
The Python Package Index, abbreviated as PyPI (/ ˌ p aɪ p i ˈ aɪ /) and also known as the Cheese Shop (a reference to the Monty Python's Flying Circus sketch "Cheese Shop"), [2]: 8 [3]: 742 is the official third-party software repository for Python. [4] It is analogous to the CPAN repository for Perl [5]: 36 and to the CRAN repository for R.
Open Library is an online project intended to create "one web page for every book ever published". Created by Aaron Swartz, [3] [4] Brewster Kahle, [5] Alexis Rossi, [6] Anand Chitipothu, [6] and Rebecca Hargrave Malamud, [6] Open Library is a project of the Internet Archive, a nonprofit organization.