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The standard algorithm for hierarchical agglomerative clustering (HAC) has a time complexity of () and requires () memory, which makes it too slow for even medium data sets. . However, for some special cases, optimal efficient agglomerative methods (of complexity ()) are known: SLINK [2] for single-linkage and CLINK [3] for complete-linkage clusteri
Ward's minimum variance method can be defined and implemented recursively by a Lance–Williams algorithm. The Lance–Williams algorithms are an infinite family of agglomerative hierarchical clustering algorithms which are represented by a recursive formula for updating cluster distances at each step (each time a pair of clusters is merged).
WPGMA (Weighted Pair Group Method with Arithmetic Mean) is a simple agglomerative (bottom-up) hierarchical clustering method, generally attributed to Sokal and Michener. [ 1 ] The WPGMA method is similar to its unweighted variant, the UPGMA method.
Cluster analysis or clustering is the task of grouping a set of objects in such a way that objects in the same group (called a cluster) are more similar (in some specific sense defined by the analyst) to each other than to those in other groups (clusters).
Several of these models correspond to well-known heuristic clustering methods. For example, k-means clustering is equivalent to estimation of the EII clustering model using the classification EM algorithm. [8] The Bayesian information criterion (BIC) can be used to choose the best clustering model as well as the number of clusters. It can also ...
In the theory of cluster analysis, the nearest-neighbor chain algorithm is an algorithm that can speed up several methods for agglomerative hierarchical clustering.These are methods that take a collection of points as input, and create a hierarchy of clusters of points by repeatedly merging pairs of smaller clusters to form larger clusters.
The definition of 'shortest distance' is what differentiates between the different agglomerative clustering methods. In complete-linkage clustering, the link between two clusters contains all element pairs, and the distance between clusters equals the distance between those two elements (one in each cluster) that are farthest away from each ...
UPGMA (unweighted pair group method with arithmetic mean) is a simple agglomerative (bottom-up) hierarchical clustering method. It also has a weighted variant, WPGMA, and they are generally attributed to Sokal and Michener.