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  2. Template modeling score - Wikipedia

    en.wikipedia.org/wiki/Template_modeling_score

    The TM-score indicates the similarity between two structures by a score between (,], where 1 indicates a perfect match between two structures (thus the higher the better). [1] Generally scores below 0.20 corresponds to randomly chosen unrelated proteins whereas structures with a score higher than 0.5 assume roughly the same fold. [ 2 ]

  3. Structural alignment software - Wikipedia

    en.wikipedia.org/wiki/Structural_alignment_software

    TM-align TM-score based protein structure alignment: Cα: Pair: nil: server and download: Y. Zhang & J. Skolnick: 2005 mTM-align Multiple protein structure alignment based on TM-align Cα Multi No server and download: R. Dong, Z. Peng, Y. Zhang & J. Yang 2018 VAST Vector Alignment Search Tool: SSE: Pair: nil: server: S. Bryant: 1996 PrISM

  4. Root mean square deviation of atomic positions - Wikipedia

    en.wikipedia.org/wiki/Root_mean_square_deviation...

    TM-score – a different structure comparison measure; Longest continuous segment (LCS) — A different structure comparison measure; Global distance calculation (GDC_sc, GDC_all) — Structure comparison measures that use full-model information (not just α-carbon) to assess similarity

  5. Standard score - Wikipedia

    en.wikipedia.org/wiki/Standard_score

    Comparison of the various grading methods in a normal distribution, including: standard deviations, cumulative percentages, percentile equivalents, z-scores, T-scores. In statistics, the standard score is the number of standard deviations by which the value of a raw score (i.e., an observed value or data point) is above or below the mean value of what is being observed or measured.

  6. Score test - Wikipedia

    en.wikipedia.org/wiki/Score_test

    If the null hypothesis is true, the likelihood ratio test, the Wald test, and the Score test are asymptotically equivalent tests of hypotheses. [8] [9] When testing nested models, the statistics for each test then converge to a Chi-squared distribution with degrees of freedom equal to the difference in degrees of freedom in the two models. If ...

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  8. Biplot - Wikipedia

    en.wikipedia.org/wiki/Biplot

    The scattered points are the input scores of observations and the arrows show the contribution of each feature to the input loading vectors. Spectramap biplot of Anderson's iris data set Discriminant analysis biplot of Fisher's iris data. Biplots are a type of exploratory graph used in statistics, a generalization of the simple two-variable ...

  9. Talk:Template modeling score - Wikipedia

    en.wikipedia.org/wiki/Talk:Template_modeling_score

    Max in TM-score equation. It would be helpful to explain what this max is taken over. Aviad.rubinstein 21:25, 30 ... Statistics; Cookie statement; Mobile view ...