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Its symbol is Δ f G˚. All elements in their standard states (diatomic oxygen gas, graphite, etc.) have standard Gibbs free energy change of formation equal to zero, as there is no change involved. Δ f G = Δ f G˚ + RT ln Q f, where Q f is the reaction quotient. At equilibrium, Δ f G = 0, and Q f = K, so the equation becomes Δ f G˚ = − ...
The definition of the Gibbs function is = + where H is the enthalpy defined by: = +. Taking differentials of each definition to find dH and dG, then using the fundamental thermodynamic relation (always true for reversible or irreversible processes): = where S is the entropy, V is volume, (minus sign due to reversibility, in which dU = 0: work other than pressure-volume may be done and is equal ...
In a simulation, the potential energy of an atom, , is given by [3] = (()) + (), where is the distance between atoms and , is a pair-wise potential function, is the contribution to the electron charge density from atom of type at the location of atom , and is an embedding function that represents the energy required to place atom of type into the electron cloud.
Ligand efficiency is a measurement of the binding energy per atom of a ligand to its binding partner, such as a receptor or enzyme. [1]Ligand efficiency is used in drug discovery research programs to assist in narrowing focus to lead compounds with optimal combinations of physicochemical properties and pharmacological properties.
Using the Eyring equation, there is a straightforward relationship between ΔG ‡, first-order rate constants, and reaction half-life at a given temperature. At 298 K, a reaction with ΔG ‡ = 23 kcal/mol has a rate constant of k ≈ 8.4 × 10 −5 s −1 and a half life of t 1/2 ≈ 2.3 hours, figures that are often rounded to k ~ 10 −4 s ...
This dependence on microscopic variables is the central point of statistical mechanics. With a model of the microscopic constituents of a system, one can calculate the microstate energies, and thus the partition function, which will then allow us to calculate all the other thermodynamic properties of the system.
In molecular spectroscopy, the Birge–Sponer method or Birge–Sponer plot is a way to calculate the dissociation energy of a molecule. This method takes its name from Raymond Thayer Birge and Hertha Sponer, the two physical chemists that developed it. A detailed example may be found here. [1]
The standard Gibbs free energy of formation (G f °) of a compound is the change of Gibbs free energy that accompanies the formation of 1 mole of a substance in its standard state from its constituent elements in their standard states (the most stable form of the element at 1 bar of pressure and the specified temperature, usually 298.15 K or 25 °C).