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TM-score between two protein structures (e.g., a template structure and a target structure) is defined by = [+ (())] where is the length of the amino acid sequence of the target protein, and is the number of residues that appear in both the template and target structures.
I-TASSER is a template-based method for protein structure and function prediction. [1] ... predicted TM-score and RMSD for the first model, ...
Transitive Consistency Score (TCS) is an extended version of the T-Coffee scoring scheme. [14] It uses T-Coffee libraries of pairwise alignments to evaluate any third party MSA. Pairwise projections can be produced using fast or slow methods, thus allowing a trade-off between speed and accuracy.
After a threading/PSI-BLAST job, one can see a ranking list of all the templates. For each template, people can view the alignment, E-value and numerous other specific scores. Also, the functional information of the template and its SCOP classification are provided. One can also view the sequence's PSM matrix and secondary structure prediction.
Score: 20 Presumably from the practice, in counting sheep or large herds of cattle, of counting orally from one to twenty, and making a score or notch on a stick, before proceeding to count the next twenty. [3] [4] A distance of twenty yards in ancient archery and gunnery. [5] Threescore: 60 Three score (3x20) Large: 1,000 Slang for one ...
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1 Max in TM-score equation. 1 comment. Toggle the table of contents. Talk: Template modeling score. Add languages. Page contents not supported in other languages.