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Nitrification is the biological oxidation of ammonia to nitrate via the intermediary nitrite. Nitrification is an important step in the nitrogen cycle in soil. The process of complete nitrification may occur through separate organisms [1] or entirely within one organism, as in comammox bacteria.
Nitrifying bacteria are chemolithotrophic organisms that include species of genera such as Nitrosomonas, Nitrosococcus, Nitrobacter, Nitrospina, Nitrospira and Nitrococcus. These bacteria get their energy from the oxidation of inorganic nitrogen compounds. [1] Types include ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB).
Morphology and characteristics. Nitrobacter are gram-negative bacteria and are either rod-shaped, pear-shaped or pleomorphic. [1][2] They are typically 0.5–0.9 μm in width and 1.0–2.0 μm in length and have an intra-cytomembrane polar cap. [5][2] Due to the presence of cytochromes c, they are often yellow in cell suspensions. [5]
Nitrosomonas is a genus of Gram-negative bacteria, belonging to the Betaproteobacteria. It is one of the five genera of ammonia-oxidizing bacteria [8] and, as an obligate chemolithoautotroph, [9] uses ammonia ( ) as an energy source and carbon dioxide ( ) as a carbon source in presence of oxygen.
Dissimilatory nitrate reduction to ammonium is a two step process, reducing NO 3− to NO 2− then NO 2− to NH 4+, though the reaction may begin with NO 2− directly. [1] Each step is mediated by a different enzyme, the first step of dissimilatory nitrate reduction to ammonium is usually mediated by a periplasmic nitrate reductase.
Denitrifying bacteria are a diverse group of bacteria that encompass many different phyla. This group of bacteria, together with denitrifying fungi and archaea, is capable of performing denitrification as part of the nitrogen cycle. [1] Denitrification is performed by a variety of denitrifying bacteria that are widely distributed in soils and ...
Denitrification. Nitrogen cycle. Denitrification is a microbially facilitated process where nitrate (NO 3−) is reduced and ultimately produces molecular nitrogen (N 2) through a series of intermediate gaseous nitrogen oxide products. Facultative anaerobic bacteria perform denitrification as a type of respiration that reduces oxidized forms of ...
Microbial metabolism is the means by which a microbe obtains the energy and nutrients (e.g. carbon) it needs to live and reproduce.Microbes use many different types of metabolic strategies and species can often be differentiated from each other based on metabolic characteristics.