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The genomic epidemiological database for global identification of microorganisms or global microbial identifier [1] is a platform for storing whole genome sequencing data of microorganisms, for the identification of relevant genes and for the comparison of genomes to detect and track-and-trace infectious disease outbreaks and emerging pathogens. [2]
This list of sequenced eubacterial genomes contains most of the eubacteria known to have publicly available complete genome sequences.Most of these sequences have been placed in the International Nucleotide Sequence Database Collaboration, a public database which can be searched [1] on the web.
BASys (Bacterial Annotation System) is a freely available web server that can be used to perform automated, comprehensive annotation of bacterial genomes. [2] With the advent of next generation DNA sequencing it is now possible to sequence the complete genome of a bacterium (typically ~4 million bases) within a single day.
Whole genome sequencing (WGS) is the process of determining the entirety, or nearly the entirety, of the DNA sequence of an organism's genome at a single time. [2] This entails sequencing all of an organism's chromosomal DNA as well as DNA contained in the mitochondria and, for plants, in the chloroplast .
BacMap; Content; Description: A database of annotated bacterial genomes and their chromosome/genome maps: Data types captured: Gene sequence data, protein sequence data, general gene and protein annotation, gene positions, general genome/proteome statistics, taxonomic and phenotypic information, bacterial chromosome maps (images)
The 100K Pathogen Genome Project is conducting high-throughput next-generation sequencing (NGS) to investigate the genomes of targeted microorganisms, with whole genome sequencing to be carried out on a small number of microorganisms for use as a reference genome. Most bacterial strains will be sequenced and assembled as draft genomes; however ...