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Free open source GNU GPLv2 or later EMBOSS: Suite of packages for sequencing, searching, etc. written in C: Linux, macOS, Unix, Windows [4] GPL and LGPL: Collaborative project Galaxy: Scientific workflow and data integration system Unix-like: Academic Free: Collaborative project GenePattern
All web applications, both traditional and Web 2.0, are operated by software running somewhere. This is a list of free software which can be used to run alternative web applications. Also listed are similar proprietary web applications that users may be familiar with. Most of this software is server-side software, often running on a web server.
[3] [4] From the beginning, the project was made open source, becoming an Apache Incubator project in March 2016 and a top-level Apache Software Foundation project in January 2019. Airflow is written in Python, and workflows are created via Python scripts. Airflow is designed under the principle of "configuration as code".
This server includes many bioinformatics tools that are widely useful in many areas of genomics research. Users can create logins, and save histories, workflows, and datasets on the server. These saved items can also be shared with others. As open-source software that can be downloaded, installed and customized to address specific needs. [20]
Kepler is a free software system for designing, executing, reusing, evolving, archiving, and sharing scientific workflows. [2] [3] [4] Kepler's facilities provide process and data monitoring, provenance information, and high-speed data movement.
Modeler, a web-based graphical workflow authoring interface; Designer, an Eclipse plug-in for developing workflows; Engine, the core workflow processor; Explorer, a web tool to deploy process definitions, start new process instances and carry-out work on workflows; Cycle, a web app for collaboration between business users and software engineers