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  2. DNA–DNA hybridization - Wikipedia

    en.wikipedia.org/wiki/DNA–DNA_hybridization

    DNA–DNA hybridization (DDH) is used as a primary method to distinguish bacterial species as it is difficult to visually classify them accurately. [7] This technique is not widely used on larger organisms where differences in species are easier to identify.

  3. Genotyping - Wikipedia

    en.wikipedia.org/wiki/Genotyping

    Genotyping is the process of determining differences in the genetic make-up of an individual by examining the individual's DNA sequence using biological assays and comparing it to another individual's sequence or a reference sequence.

  4. Phage typing - Wikipedia

    en.wikipedia.org/wiki/Phage_typing

    The bacterial strain is assigned a type based on its lysis pattern. [3] Phage typing was used to trace the source of infectious outbreaks throughout the 1900s, but it has been replaced by genotypic methods such as whole genome sequencing for epidemiological characterization. [1]

  5. Bacterial taxonomy - Wikipedia

    en.wikipedia.org/wiki/Bacterial_taxonomy

    Bacterial taxonomy is subfield of taxonomy devoted to the classification of bacteria specimens into taxonomic ranks. Archaeal taxonomy are governed by the same rules. In the scientific classification established by Carl Linnaeus , [ 1 ] each species is assigned to a genus resulting in a two-part name.

  6. Bergey's Manual of Systematic Bacteriology - Wikipedia

    en.wikipedia.org/wiki/Bergey's_Manual_of...

    Bergey's Manual Trust was established in 1936 to sustain the publication of Bergey's Manual of Determinative Bacteriology and supplementary reference works. The Trust also recognizes individuals who have made outstanding contributions to bacterial taxonomy by presentation of the Bergey Award and Bergey Medal, jointly supported by funds from the Trust and from Springer, the publishers of the ...

  7. Diagnostic microbiology - Wikipedia

    en.wikipedia.org/wiki/Diagnostic_Microbiology

    This method, which is commonly used with Mueller–Hinton agar, is used by evenly seeding bacteria over a petri dish and applying an antibiotic treated disk to the top of the agar. By observing the ring formed around the disk formed due to the lack of bacterial growth, the zone of inhibition can be found, which is used to find the ...

  8. Analytical profile index - Wikipedia

    en.wikipedia.org/wiki/Analytical_profile_index

    The analytical profile index, or API, is a classification system for bacteria based on biochemical tests. The system was developed to accelerate the speed of identifying clinically relevant bacteria. It can only be used to identify known species from an index. [1] The data obtained are phenotypic traits.

  9. Microbial DNA barcoding - Wikipedia

    en.wikipedia.org/wiki/Microbial_DNA_barcoding

    Universal 16S bacterial primers have been used successfully to isolate cyanobacterial rDNA from environmental samples, but they also recover many bacterial sequences. [ 18 ] [ 19 ] The use of cyanobacteria-specific [ 20 ] or phyto-specific 16S markers is commonly used for focusing on cyanobacteria only. [ 21 ]