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2. List of phylogenetic tree visualization software - Wikipedia

   en.wikipedia.org/wiki/List_of_phylogenetic_tree...

   ETE toolkit Tree Viewer [2] an online tool for phylogenetic tree view (newick format) that allows multiple sequence alignments to be shown together with the trees (fasta format) EvolView [3] an online tool for visualizing, annotating and managing phylogenetic trees IcyTree [4] Client-side Javascript SVG viewer for annotated rooted trees.

3. Tree structure - Wikipedia

   en.wikipedia.org/wiki/Tree_structure

   A tree structure, tree diagram, or tree model is a way of representing the hierarchical nature of a structure in a graphical form. It is named a "tree structure" because the classic representation resembles a tree , although the chart is generally upside down compared to a biological tree, with the "stem" at the top and the "leaves" at the bottom.

4. Newick format - Wikipedia

   en.wikipedia.org/wiki/Newick_format

   Tree: The full input Newick Format for a single tree Subtree: an internal node (and its descendants) or a leaf node Leaf: a node with no descendants Internal: a node and its one or more descendants BranchSet: a set of one or more Branches Branch: a tree edge and its descendant subtree. Name: the name of a node Length: the length of a tree edge.

5. Family tree - Wikipedia

   en.wikipedia.org/wiki/Family_tree

   Family tree showing the relationship of each person to the orange person, including cousins and gene share. A family tree, also called a genealogy or a pedigree chart, is a chart representing family relationships in a conventional tree structure. More detailed family trees, used in medicine and social work, are known as genograms.

6. Computational phylogenetics - Wikipedia

   en.wikipedia.org/wiki/Computational_phylogenetics

   Phylogenetic trees generated by computational phylogenetics can be either rooted or unrooted depending on the input data and the algorithm used. A rooted tree is a directed graph that explicitly identifies a most recent common ancestor (MRCA), [citation needed] usually an inputed sequence that is not represented in the input.

7. Ukkonen's algorithm - Wikipedia

   en.wikipedia.org/wiki/Ukkonen's_algorithm

   In computer science, Ukkonen's algorithm is a linear-time, online algorithm for constructing suffix trees, proposed by Esko Ukkonen in 1995. [1] The algorithm begins with an implicit suffix tree containing the first character of the string. Then it steps through the string, adding successive characters until the tree is complete.