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A variety of file formats are supported for reading and writing, including Newick, NEXUS and phyloXML. Common tree manipulations and traversals are supported via the Tree and Clade objects. Examples include converting and collating tree files, extracting subsets from a tree, changing a tree's root, and analysing branch features such as length ...
Tree: The full input Newick Format for a single tree Subtree: an internal node (and its descendants) or a leaf node Leaf: a node with no descendants Internal: a node and its one or more descendants BranchSet: a set of one or more Branches Branch: a tree edge and its descendant subtree. Name: the name of a node Length: the length of a tree edge.
Trees are commonly used to represent or manipulate hierarchical data in applications such as: . File systems for: . Directory structure used to organize subdirectories and files (symbolic links create non-tree graphs, as do multiple hard links to the same file or directory)
An abstract syntax tree (AST) is a data structure used in computer science to represent the structure of a program or code snippet. It is a tree representation of the abstract syntactic structure of text (often source code ) written in a formal language .
A "Fenwick tree" is actually three implicit trees over the same array: the interrogation tree used for translating indexes to prefix sums, the update tree used for updating elements, and the search tree for translating prefix sums to indexes (rank queries). [4] The first two are normally walked upwards, while the third is usually walked downwards.
Pages in category "Articles with example Python (programming language) code" The following 200 pages are in this category, out of approximately 201 total. This list may not reflect recent changes. (previous page)
An open file format is a file format for storing digital data, defined by a published specification usually maintained by a standards organization, and which can be used and implemented by anyone. For example, an open format can be implemented by both proprietary and free and open source software , using the typical software licenses used by each.