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UniProt Knowledgebase (UniProtKB) is a protein database partially curated by experts, consisting of two sections: UniProtKB/Swiss-Prot (containing reviewed, manually annotated entries) and UniProtKB/TrEMBL (containing unreviewed, automatically annotated entries). [11]
The page also presents tabulated summaries of the number of PPIs per domain and are also hyperlinked to their PPI summary page. Another tabulated feature is a comparison of the DD superfamily mediated PPI pairs found on the Death Domain database to other PPI databases.
The UniProtKB accession number P39394 indicates the general structure of the SymE toxin in Escherichia coli. [1] [7] In the SWISS-MODEL SymE theoretical model, the -helix contains amino acids G44, Q45, W46, L47, E48, A49, and A50.
C7orf50, also known as YCR016W, MGC11257, and LOC84310, is a protein coding gene of poor characterization in need of further research. This gene can be accessed on NCBI at the accession number NC_000007.14, on HGNC at the ID number 22421, on ENSEMBL at the ID ENSG00000146540, on GeneCards at GCID:GC07M000996, and on UniProtKB at the ID Q9BRJ6.
Only signatures deemed to be of sufficient quality are integrated into InterPro. As of version 81.0 (released 21 August 2020) InterPro entries annotated 73.9% of residues found in UniProtKB with another 9.2% annotated by signatures that are pending integration. [5] The coverage of UniProtKB residues by InterPro entries as of InterPro version 81 ...
List of PDB id codes; Identifiers , DXS8237E, GPATC9 ... (UniProtKB-P98175; ... One reason for this is the difference in the copy number of the RBM10 gene in a cell ...
The NCBI assigns a unique identifier (taxonomy ID number) to each species of organism. [5] The NCBI has software tools that are available through web browsers or by FTP. For example, BLAST is a sequence similarity searching program. BLAST can do sequence comparisons against the GenBank DNA database in less than 15 seconds.
SNED1 is located on the plus strand of chromosome 2 at locus 2q37.3. The Refseq identification number is NM_001080437.3 The genomic DNA sequence of SNED1 contains 98,159bp and the longest spliced mRNA as predicted by AceView is 7048bp and contains 31 exons. There are 9 predicted splice variants of SNED1 that exhibited protein structure matches ...