Ads
related to: pathway analysis toolsinsightsoftware.com has been visited by 10K+ users in the past month
Search results
Results From The WOW.Com Content Network
PathwaySeq [154] Pathway analysis for RNA-Seq data using a score-based approach. petal Co-expression network modelling in R. ToPASeq: [155] an R package for topology-based pathway analysis of microarray and RNA-Seq data. RNA-Enrich A cut-off free functional enrichment testing method for RNA-seq with improved detection power.
Pathway resources and types of pathway analysis using databases like KEGG, Reactome and WikiPathways. [1]Pathway is the term from molecular biology for a curated schematic representation of a well characterized segment of the molecular physiological machinery, such as a metabolic pathway describing an enzymatic process within a cell or tissue or a signaling pathway model representing a ...
PathVisio is a free open-source pathway analysis and drawing software. It allows drawing, editing, and analyzing biological pathways. Visualization of ones experimental data on the pathways for finding relevant pathways that are over-represented in your data set is possible. [1] [2] [3]
KEGG (Kyoto Encyclopedia of Genes and Genomes) is a collection of databases dealing with genomes, biological pathways, diseases, drugs, and chemical substances.KEGG is utilized for bioinformatics research and education, including data analysis in genomics, metagenomics, metabolomics and other omics studies, modeling and simulation in systems biology, and translational research in drug development.
tool for displaying and editing biological pathways multiplatform (Java-based) Apache License: InCroMAP: tool for the integration of omics data and joint visualization of experimental data in pathways multiplatform (Java-based) LGPL: Pathview: pathway based data integration and visualization, easy to use and integrate into pathway analysis
As noted above MetPA performs two types of pathway analysis: 1) Pathway (or Metabolite Set) Enrichment Analysis; and 2) Pathway Topological Analysis. Pathway Enrichment Analysis (which is similar to MSEA) identifies which metabolic pathways have compounds (from the input lists) that are over-represented and have significant perturbations to ...