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  2. Plasmid preparation - Wikipedia

    en.wikipedia.org/wiki/Plasmid_preparation

    Minipreparation of plasmid DNA is a rapid, small-scale isolation of plasmid DNA from bacteria. [20] [21] Commonly used miniprep methods include alkaline lysis and spin-column based kits. [3] [22] It is based on the alkaline lysis method. The extracted plasmid DNA resulting from performing a miniprep is itself often called a "miniprep".

  3. Limulus amebocyte lysate - Wikipedia

    en.wikipedia.org/wiki/Limulus_amebocyte_lysate

    Atlantic horseshoe crab Limulus polyphemus. Limulus amebocyte lysate (LAL) is an aqueous extract of motile blood cells from the Atlantic horseshoe crab Limulus polyphemus.LAL reacts with bacterial endotoxins such as lipopolysaccharides (LPS), which are components of the bacterial capsule, the outermost membrane of cell envelope of gram-negative bacteria.

  4. Lipopolysaccharide - Wikipedia

    en.wikipedia.org/wiki/Lipopolysaccharide

    Structure of a lipopolysaccharide (LPS) Lipopolysaccharide, now more commonly known as endotoxin, [1] is a collective term for components of the outermost membrane of the cell envelope of gram-negative bacteria, such as E. coli and Salmonella [2] with a common structural architecture.

  5. Spin column-based nucleic acid purification - Wikipedia

    en.wikipedia.org/wiki/Spin_column-based_nucleic...

    The different stages of the method are lyse, bind, wash, and elute. [1] [2] More specifically, this entails the lysis of target cells to release nucleic acids, selective binding of nucleic acid to a silica membrane, washing away particulates and inhibitors that are not bound to the silica membrane, and elution of the nucleic acid, with the end result being purified nucleic acid in an aqueous ...

  6. Gel extraction - Wikipedia

    en.wikipedia.org/wiki/Gel_extraction

    Gel extraction kits are available from several major biotech manufacturers for a final cost of approximately 1–2 US$ per sample. Protocols included in these kits generally call for the dissolution of the gel-slice in 3 volumes of chaotropic agent at 50 °C, followed by application of the solution to a spin-column (the DNA remains in the column), a 70% ethanol wash (the DNA remains in the ...

  7. Restriction digest - Wikipedia

    en.wikipedia.org/wiki/Restriction_digest

    Restriction digest is most commonly used as part of the process of the molecular cloning of DNA fragment into a vector (such as a cloning vector or an expression vector).The vector typically contains a multiple cloning site where many restriction site may be found, and a foreign piece of DNA may be inserted into the vector by first cutting the restriction sites in the vector as well the DNA ...

  8. Depyrogenation - Wikipedia

    en.wikipedia.org/wiki/Depyrogenation

    Because endotoxin molecular weight may vary a great deal (10,000 to 1,000,000 Da), endotoxin levels are measured in "endotoxin units" (EU). One EU is approximately equivalent to 100 pg of E. coli lipopolysaccharide—the amount present in around 10 5 bacteria. Humans can develop symptoms when exposed to as little as 5 EU/kg body weight.

  9. Alkaline lysis - Wikipedia

    en.wikipedia.org/wiki/Alkaline_lysis

    Alkaline lysis is the process of isolating plasmid deoxyribonucleic acid (DNA) in bacteria. It is a standard method used in molecular biology to isolate the plasmid without obtaining chromosomal DNA. The first alkaline lysis was performed by Birnom and Doly in 1979. [ 1 ]