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2. Fiji (software) - Wikipedia

   en.wikipedia.org/wiki/FIJI_(software)

   As stated on the official website, the primary focus is "life sciences", although Fiji provides many tools helping with scientific image analysis in general. [11] Fiji is most popular in the life sciences community, where the 3D Viewer [12] helps visualizing data obtained through light microscopy, and for which Fiji provides registration, [13 ...

3. ImageJ - Wikipedia

   en.wikipedia.org/wiki/ImageJ

   Fiji (software), an image processing package based on ImageJ; KNIME - an open-source data mining environment supporting image analysis developed in close collaboration with the next generation of ImageJ; List of free and open-source software packages; Microscope image processing

4. 3D Slicer - Wikipedia

   en.wikipedia.org/wiki/3D_Slicer

   3D Slicer is a free open source software (BSD-style license) that is a flexible, modular platform for image analysis and visualization. 3D Slicer is extended to enable development of both interactive and batch processing tools for a variety of applications. [4]

5. Category:Image processing software - Wikipedia

   en.wikipedia.org/wiki/Category:Image_processing...

   This page was last edited on 21 October 2023, at 03:12 (UTC).; Text is available under the Creative Commons Attribution-ShareAlike 4.0 License; additional terms may apply.

6. Sholl analysis - Wikipedia

   en.wikipedia.org/wiki/Sholl_analysis

   Several software packages perform Sholl analysis, namely those dedicated to neuronal tracing. An open-source implementation for the image processing package Fiji can be used to perform the analysis directly from microscope imagery of neurons or their traced reconstructions. [9]

7. CellProfiler - Wikipedia

   en.wikipedia.org/wiki/CellProfiler

   Version 3.0, supporting volumetric analysis of 3D image stacks and optional deep learning modules, was released in October 2017. [16] CellProfiler 4.0 was released in September 2020 and focused on speed, usability, and utility improvements with most notable example of migration to Python 3.

8. List of free and open-source software packages - Wikipedia

   en.wikipedia.org/wiki/List_of_free_and_open...

   This is a list of free and open-source software (FOSS) packages, computer software licensed under free software licenses and open-source licenses. Software that fits the Free Software Definition may be more appropriately called free software ; the GNU project in particular objects to their works being referred to as open-source . [ 1 ]

9. Bioimage informatics - Wikipedia

   en.wikipedia.org/wiki/Bioimage_informatics

   Due to the high volume of data generated, automatic image analysis is a necessity. [ 7 ] When positive and negative controls are available, the problem can be approached as a classification problem and the same techniques of feature computation and classification that are used for subcellular location analysis can be applied.