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  2. Mascot (software) - Wikipedia

    en.wikipedia.org/wiki/Mascot_(software)

    Mascot’s fundamental approach to identifying peptides is to calculate the probability whether an observed match between experimental data and peptide sequences found in a reference database has occurred by chance. The match with the lowest probability of occurring by chance is returned as the most significant match.

  3. List of mass spectrometry software - Wikipedia

    en.wikipedia.org/wiki/List_of_mass_spectrometry...

    Rational Numbers Excel Add-In Proprietary: De novo identification tool for small molecules that works with Microsoft Excel (2010, 2013, 2016 and 2019). This software treats small molecules as mathematical partitions of the molecular mass and generates subfragment formulas with atoms that are sets of partitions comprising the molecular formula.

  4. Peptide amphiphile - Wikipedia

    en.wikipedia.org/wiki/Peptide_amphiphile

    Peptide amphiphiles were developed in the 1990s. They were first described by the group of Matthew Tirrell in 1995. [5] [6] These first reported PA molecules were composed of two domains: one of lipophilic character and another of hydrophilic properties, which allowed self-assembly into sphere-like supramolecular structures as a result of the association of the lipophilic domains away from the ...

  5. Ribbon diagram - Wikipedia

    en.wikipedia.org/wiki/Ribbon_diagram

    One type of spline implementation passes through each Cα guide point, producing an exact but choppy curve. Both hand-drawn and most computer ribbons (such as those shown here) are smoothed over about four successive guide points (usually the peptide midpoint) to produce a more visually pleasing and understandable representation.

  6. Protein primary structure - Wikipedia

    en.wikipedia.org/wiki/Protein_primary_structure

    Finally, the peptide side chains can also be modified covalently, e.g., phosphorylation; Aside from cleavage, phosphorylation is perhaps the most important chemical modification of proteins. A phosphate group can be attached to the sidechain hydroxyl group of serine, threonine and tyrosine residues, adding a negative charge at that site and ...

  7. Singular point of a curve - Wikipedia

    en.wikipedia.org/wiki/Singular_point_of_a_curve

    A curve with a triple point at the origin: x(t) = sin(2t) + cos(t), y(t) = sin(t) + cos(2t) In general, if all the terms of degree less than k are 0, and at least one term of degree k is not 0 in f, then curve is said to have a multiple point of order k or a k-ple point.

  8. Riemann's differential equation - Wikipedia

    en.wikipedia.org/wiki/Riemann's_differential...

    In mathematics, Riemann's differential equation, named after Bernhard Riemann, is a generalization of the hypergeometric differential equation, allowing the regular singular points to occur anywhere on the Riemann sphere, rather than merely at 0, 1, and . The equation is also known as the Papperitz equation. [1]

  9. Peptide bond - Wikipedia

    en.wikipedia.org/wiki/Peptide_bond

    Peptide bond formation via dehydration reaction. When two amino acids form a dipeptide through a peptide bond, [1] it is a type of condensation reaction. [2] In this kind of condensation, two amino acids approach each other, with the non-side chain (C1) carboxylic acid moiety of one coming near the non-side chain (N2) amino moiety of the other.

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    peptide calculator by singular points formula sheet excel printable free