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  2. Enzyme catalysis - Wikipedia

    en.wikipedia.org/wiki/Enzyme_catalysis

    Enzyme changes shape by induced fit upon substrate binding to form enzyme-substrate complex. Hexokinase has a large induced fit motion that closes over the substrates adenosine triphosphate and xylose. Binding sites in blue, substrates in black and Mg 2+ cofactor in yellow. (The different mechanisms of substrate binding

  3. Active site - Wikipedia

    en.wikipedia.org/wiki/Active_site

    The induced fit model is a development of the lock-and-key model and assumes that an active site is flexible and changes shape until the substrate is completely bound. This model is similar to a person wearing a glove: the glove changes shape to fit the hand. The enzyme initially has a conformation that attracts its substrate.

  4. Docking (molecular) - Wikipedia

    en.wikipedia.org/wiki/Docking_(molecular)

    Definition of problem [ edit ] One can think of molecular docking as a problem of “lock-and-key” , in which one wants to find the correct relative orientation of the “key” which will open up the “lock” (where on the surface of the lock is the key hole, which direction to turn the key after it is inserted, etc.).

  5. Enzyme - Wikipedia

    en.wikipedia.org/wiki/Enzyme

    Enzyme changes shape by induced fit upon substrate binding to form enzyme-substrate complex. Hexokinase has a large induced fit motion that closes over the substrates adenosine triphosphate and xylose. Binding sites in blue, substrates in black and Mg 2+ cofactor in yellow.

  6. Allosteric regulation - Wikipedia

    en.wikipedia.org/wiki/Allosteric_regulation

    Allosteric regulation of an enzyme. In the fields of biochemistry and pharmacology an allosteric regulator (or allosteric modulator) is a substance that binds to a site on an enzyme or receptor distinct from the active site, resulting in a conformational change that alters the protein's activity, either enhancing or inhibiting its function.

  7. Walker motifs - Wikipedia

    en.wikipedia.org/wiki/Walker_motifs

    Walker motif A-binding has been shown to cause structural changes in the bound nucleotide, along the line of the induced fit model of enzyme binding. [citation needed]

  8. Cooperative binding - Wikipedia

    en.wikipedia.org/wiki/Cooperative_binding

    The first description of cooperative binding to a multi-site protein was developed by A.V. Hill. [4] Drawing on observations of oxygen binding to hemoglobin and the idea that cooperativity arose from the aggregation of hemoglobin molecules, each one binding one oxygen molecule, Hill suggested a phenomenological equation that has since been named after him:

  9. File:Induced fit diagram.svg - Wikipedia

    en.wikipedia.org/wiki/File:Induced_fit_diagram.svg

    Induced fit diagram w. Swe. captions.png en:Image:Induced fit diagram mod 2.png , Image:Induced fit diagram pt.svg (portuguese version) This SVG file contains embedded text that can be translated into your language, using any capable SVG editor, text editor or the SVG Translate tool .