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  2. List of protein subcellular localization prediction tools

    en.wikipedia.org/wiki/List_of_protein_sub...

    This list of protein subcellular localisation prediction tools includes software, databases, and web services that are used for protein subcellular localization prediction. Some tools are included that are commonly used to infer location through predicted structural properties, such as signal peptide or transmembrane helices , and these tools ...

  3. Palmitoylation - Wikipedia

    en.wikipedia.org/wiki/Palmitoylation

    An example of a protein that undergoes palmitoylation is hemagglutinin, a membrane glycoprotein used by influenza to attach to host cell receptors. [5] The palmitoylation cycles of a wide array of enzymes have been characterized in the past few years, including H-Ras, Gsα, the β2-adrenergic receptor, and endothelial nitric oxide synthase (eNOS

  4. RaptorX - Wikipedia

    en.wikipedia.org/wiki/RaptorX

    An email is sent to the user together with a link to a web page of results. RaptorX Server currently generates the following results: 3-state and 8-state secondary structure prediction, sequence-template alignment, 3D structure prediction, solvent accessibility prediction, disorder prediction and binding site prediction.

  5. List of protein structure prediction software - Wikipedia

    en.wikipedia.org/wiki/List_of_protein_structure...

    Constituent amino-acids can be analyzed to predict secondary, tertiary and quaternary protein structure. This list of protein structure prediction software summarizes notable used software tools in protein structure prediction, including homology modeling, protein threading, ab initio methods, secondary structure prediction, and transmembrane helix and signal peptide prediction.

  6. List of mass spectrometry software - Wikipedia

    en.wikipedia.org/wiki/List_of_mass_spectrometry...

    This commercial software processing tool within PeakView allows targeted data processing of SWATH acquisition data. Using a protein/peptide ion library, fragment ion extracted ion chromatograms (XICs) are generated, scored and quantified for peptides from the library.

  7. Predictprotein - Wikipedia

    en.wikipedia.org/wiki/Predictprotein

    PredictProtein (PP) is an automatic service that searches up-to-date public sequence databases, creates alignments, and predicts aspects of protein structure and function. Users send a protein sequence and receive a single file with results from database comparisons and prediction methods.

  8. List of protein secondary structure prediction programs

    en.wikipedia.org/wiki/List_of_protein_secondary...

    Name Method description Type Link Initial release RaptorX-SS8 : predict both 3-state and 8-state secondary structure using conditional neural fields from PSI-BLAST profiles ...

  9. Jpred - Wikipedia

    en.wikipedia.org/wiki/Jpred

    Jpred v.4 is the latest version of the JPred Protein Secondary Structure Prediction Server [1] which provides predictions by the JNet algorithm, one of the most accurate methods for secondary structure prediction, [2] that has existed since 1998 in different versions.