Search results
Results From The WOW.Com Content Network
Most Ensembl Genomes data is stored in MySQL relational databases and can be accessed by the Ensembl REST interface, the Perl API, Biomart or online. [5] Ensembl Genomes is an open project, and most of the code, tools, and data are available to the public. [6] Ensembl and Ensembl Genomes software uses an Apache 2.0 license [7] license.
In the Ensembl project, sequence data are fed into the gene annotation system (a collection of software "pipelines" written in Perl) which creates a set of predicted gene locations and saves them in a MySQL database for subsequent analysis and display. Ensembl makes these data freely accessible to the world research community.
Java, C#, C, Python, Go, Node.js, Perl, libevent, PHP, Ruby, Rust Open Source (AGPL) Flash-optimized in-memory open source NoSQL database. ALTIBASE HDB: Altibase Corporation 1999 Java, C, C++, JDBC, ODBC, SQL Proprietary Altibase is a hybrid DBMS that combines an in-memory database with a conventional disk-resident database in a single unified ...
The Browser is a graphical viewer optimized to support fast interactive performance and is an open-source, web-based tool suite built on top of a MySQL database for rapid visualization, examination, and querying of the data at many levels. The Genome Browser Database, browsing tools, downloadable data files, and documentation can all be found ...
Sequelize, Node.js ORM tool for Postgres, MySQL, MariaDB, SQLite, DB2, Microsoft SQL Server, and Snowflake; Typeorm, Typescript/Javascript scalable ORM tool; MikroORM, TypeScript ORM based on Data Mapper, Unit of Work and Identity Map patterns. Supports PostgreSQL, MySQL, SQLite (including libSQL), MongoDB, and MariaDB
The EMBL Nucleotide Sequence Database (EMBL-Bank) has increased in size from around 600 entries in 1982 to over 2.5×10 8 by December 2012. [16] The EMBL Nucleotide Sequence Database (also known as EMBL-Bank) is the section of the ENA which contains high-level genome assembly details, as well as assembled sequences and their functional annotation.
Based at the EMBL-EBI, the Ensembl [11] is a database organized around genomic data, maintained by the Ensembl Project. Tasked with the continuous annotation of the genomes of model organisms, Ensembl provides researchers a comprehensive resource of relevant biological information about each specific genome. The annotation of the stored ...
Query by Example (QBE) is a database query language for relational databases. It was devised by Moshé M. Zloof at IBM Research during the mid-1970s, in parallel to the development of SQL . [ 1 ] It is the first graphical query language, using visual tables where the user would enter commands, example elements and conditions.