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QIIME (English: / tʃ aɪ m / ch-eye-m) [1] is a bioinformatics data science platform, originally developed for analysis of high-throughput microbiome marker gene (e.g., 16S or 18S rRNA genes) amplicon sequencing data. There have been two major versions of the QIIME platform, QIIME 1 [2] and QIIME 2. [3]
It can map Illumina and SOLiD reads. Unlike most mapping programs, speed increases for longer read lengths. Yes Free, GPL [49] PRIMEX Indexes the genome with a k-mer lookup table with full sensitivity up to an adjustable number of mismatches. It is best for mapping 15-60 bp sequences to a genome. No No Yes No, multiple processes per search 2003
Binary Alignment Map (BAM) is the comprehensive raw data of genome sequencing; [1] it consists of the lossless, compressed binary representation of the Sequence Alignment Map-files. [2] [3] BAM is the compressed binary representation of SAM (Sequence Alignment Map), a compact and index-able representation of nucleotide sequence alignments. [4]
MapInfo TAB format – MapInfo's vector data format using TAB, DAT, ID and MAP files; Measure Map Pro format – XML data format to store GIS data; National Transfer Format (NTF) – National Transfer Format (mostly used by the UK Ordnance Survey) Spatialite – a spatial extension to SQLite, providing vector geodatabase functionality.
XML data binding refers to a means of representing information in an XML document as a business object in computer memory. This allows applications to access the data in the XML from the object, rather than using the DOM or SAX to retrieve the data from a direct representation of the XML itself.
Digital mapping, the use of a computer to depict spatial data on a map; Gene mapping, the assignment of DNA fragments to chromosomes; Mind mapping, the drawing of ideas and the relations among them; Projection mapping, the projection of videos on the surface of objects with irregular shapes; Robotic mapping, creation and use of maps by robots
.map files are utalised by the software package Radiant, a game mapping Software package. This software is used as part of the mod tools for multiple Call of Duty titles..MAPs are also identified as color maps. An example of such software that supports .map files is SoundSpectrum's G-Force music visualizer. Another form of the .MAP file is for ...
Compendium is a computer program and social science tool that facilitates the mapping and management of ideas and arguments. The software provides a visual environment that allows people to structure and record collaboration as they discuss and work through wicked problems.