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  2. k-d tree - Wikipedia

    en.wikipedia.org/wiki/K-d_tree

    Removing a point from a balanced k-d tree takes O(log n) time. Querying an axis-parallel range in a balanced k-d tree takes O(n 1−1/k +m) time, where m is the number of the reported points, and k the dimension of the k-d tree. Finding 1 nearest neighbour in a balanced k-d tree with randomly distributed points takes O(log n) time on average.

  3. List of phylogenetic tree visualization software - Wikipedia

    en.wikipedia.org/wiki/List_of_phylogenetic_tree...

    Tree inference and visualization (hierarchical, radial and axial tree views), Horizontal gene transfer detection and HGT network visualization TidyTree [17] A client-side HTML5/SVG Phylogenetic Tree Renderer, based on D3.js: TreeVector [18] scalable, interactive, phylogenetic trees for the web, produces dynamic SVG or PNG output, implemented in ...

  4. List of phylogenetics software - Wikipedia

    en.wikipedia.org/wiki/List_of_phylogenetics_software

    H. A. Schmidt, K. Strimmer, M. Vingron, and A. von Haeseler T-REX (Webserver) [53] [54] Tree inference and visualization, Horizontal gene transfer detection, multiple sequence alignment: Distance (neighbor joining), Parsimony and Maximum likelihood (PhyML, RAxML) tree inference, MUSCLE, MAFFT and ClustalW sequence alignments and related ...

  5. File:Kdtreeogg.ogv - Wikipedia

    en.wikipedia.org/wiki/File:Kdtreeogg.ogv

    English: k-d tree nearest neighbor search animation video. The tree is implicitly built, each node corresponds to a rectangle, rectangles with a single point are represented in the leaves, and each rectangle is split in two equal parts. Source code

  6. Amira (software) - Wikipedia

    en.wikipedia.org/wiki/Amira_(Software)

    Amira (ah-MEER-ah) is a software platform for visualization, processing, and analysis of 3D and 4D data. It is being actively developed by Thermo Fisher Scientific in collaboration with the Zuse Institute Berlin (ZIB), and commercially distributed by Thermo Fisher Scientific — together with its sister software Avizo.

  7. Archaeopteryx (software) - Wikipedia

    en.wikipedia.org/wiki/Archaeopteryx_(software)

    This type of program can be used for a variety of analyses of molecular data sets, but is particularly designed for phylogenomics. Besides tree description formats with limited expressiveness (such as Newick/New Hamphshire, Nexus), it also implements the phyloXML [1] format. Archaeopteryx is the successor to Java program A Tree Viewer (ATV). [2]

  8. min/max kd-tree - Wikipedia

    en.wikipedia.org/wiki/Min/max_kd-tree

    The min/max kdtree has - besides the properties of an kd-tree - the special property that an inner node's min/max values coincide each with a min/max value of either one child. This allows to discard the storage of min/max values at the leaf nodes by storing two bits at inner nodes, assigning min/max values to the children: Each inner node's ...

  9. K-D-B-tree - Wikipedia

    en.wikipedia.org/wiki/K-D-B-tree

    Using a 2-D-B-tree (2-dimensional K-D-B-tree) as an example, space is subdivided in the same manner as a k-d tree: using a point in just one of the domains, or axes in this case, all other values are either less than or greater than the current value, and fall to the left and right of the splitting plane respectively.