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A scientific workflow is the process of combining data and processes into a configurable, structured set of steps that implement semi-automated computational solutions to a scientific problem. Scientific workflow systems often provide graphical user interfaces to combine different technologies along with efficient methods for using them, and ...
Pegasus is an open-source workflow management system. [1] [2] [3] It provides the necessary abstractions for scientists to create scientific workflows [4] and allows for transparent execution of these workflows on a range of computing platforms including high performance computing clusters, clouds, and national cyberinfrastructure.
Anduril is an open source component-based workflow framework for scientific data analysis [2] developed at the Systems Biology Laboratory, University of Helsinki.. Anduril is designed to enable systematic, flexible and efficient data analysis, particularly in the field of high-throughput experiments in biomedical research.
This server includes many bioinformatics tools that are widely useful in many areas of genomics research. Users can create logins, and save histories, workflows, and datasets on the server. These saved items can also be shared with others. As open-source software that can be downloaded, installed and customized to address specific needs. [20]
Taverna workflows can invoke general SOAP/WSDL or REST Web services, and more specific SADI, BioMart, BioMoby and SoapLab Web services. It can also invoke R statistical services, local Java code, external tools on local and remote machines (via ssh), do XPath and other text manipulation, import a spreadsheet and include sub-workflows.
This is a list of free and open-source software (FOSS) packages, computer software licensed under free software licenses and open-source licenses.Software that fits the Free Software Definition may be more appropriately called free software; the GNU project in particular objects to their works being referred to as open-source. [1]
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