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Nitrification is the biological oxidation of ammonia to nitrate via the intermediary nitrite. Nitrification is an important step in the nitrogen cycle in soil. The process of complete nitrification may occur through separate organisms [1] or entirely within one organism, as in comammox bacteria. The transformation of ammonia to nitrite is ...
Nitrogen assimilation is the formation of organic nitrogen compounds like amino acids from inorganic nitrogen compounds present in the environment. Organisms like plants, fungi and certain bacteria that can fix nitrogen gas (N 2) depend on the ability to assimilate nitrate or ammonia for their needs.
An example of free-living bacteria is Azotobacter. Symbiotic nitrogen-fixing bacteria such as Rhizobium usually live in the root nodules of legumes (such as peas, alfalfa, and locust trees). Here they form a mutualistic relationship with the plant, producing ammonia in exchange for carbohydrates. Because of this relationship, legumes will often ...
One process utilizes fast growing nitrifiers utilizing nitrification of ammonia to nitrite and Anammox which is the denitrification of nitrite to atmospheric nitrogen using ammonia as an electron donor. The combination of the two processes allows for a more efficient conversion of ammonia and prevents a buildup of nitrate in the water.
The evolutionary motivation for a decoupled, two-step nitrification reaction is an area of ongoing research. In 2015, it was discovered that the species Nitrospira inopinata possesses all the enzymes required for carrying out complete nitrification in one step, suggesting that this reaction does occur. [12] [13]
The plant provides these cells with leghemoglobin, resulting in a distinct pink color. Zone IV—the senescent zone. Here plant cells and their bacteroid contents are being degraded. The breakdown of the heme component of leghemoglobin results in a visible greening at the base of the nodule.
Plants that contribute to nitrogen fixation include those of the legume family—Fabaceae— with taxa such as kudzu, clover, soybean, alfalfa, lupin, peanut and rooibos. [45] They contain symbiotic rhizobia bacteria within nodules in their root systems , producing nitrogen compounds that help the plant to grow and compete with other plants. [ 64 ]
In soil science, mineralization is the decomposition (i.e., oxidation) of the chemical compounds in organic matter, by which the nutrients in those compounds are released in soluble inorganic forms that may be available to plants. [1] [2] Mineralization is the opposite of immobilization.