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An interactive viewer for large phylogenetic trees and networks: All [22] DensiTree A viewer capable of viewing multiple overlaid trees. All [23] FigTree: Simple Java tree viewer able to read newick and nexus tree files. Can be used to color branches and produce vector artwork. All [24] JEvTrace
MNHN-Tree-Tools is an opensource phylogenetics inference software working on nucleic and protein sequences. Clustering of DNA or protein sequences and phylogenetic tree inference from a set of sequences. At the core it employs a distance-density based approach. Thomas Haschka, Loïc Ponger, Christophe Escudé and Julien Mozziconacci [25 ...
Archaeopteryx is an interactive computer software program, written in Java, for viewing, editing, and analyzing phylogenetic trees.This type of program can be used for a variety of analyses of molecular data sets, but is particularly designed for phylogenomics.
Proprietary, free use Yes Browser Official website: IVisTMSA No Clustal Omega, ClustalW2, MAFFT, MUSCLE, BioJava are integrated to construct alignment Tree calculation tool calculates phylogenetic tree using BioJava API and lets user draw trees using Archaeopteryx: Software is package of 7 interactive visual tools for multiple sequence alignments.
TreeLine is a free and simple outliner with advanced data element definition and export abilities. It uses a basic tree structure to organize information, and allows the user to define different types of nodes and leaves.
webtrees is a fork of PhpGedView, it was created in early 2010, when a majority of active PhpGedView developers stopped using SourceForge [5] [6] due to issues with exporting encrypted software. [7] [8] webtrees is the second fork of PhpGedView. In late 2005 the first one, called Genmod, [9] was created.
Software Latest release License Free to use Version Date Genea.app [1] N/A [2] 2022-03-20 MIT License: ... Individual View Mapping Notes Places Photos Recording
Tree-sitter parsers have been written for these languages and many others. [11] GitHub uses Tree-sitter to support in-browser symbolic code navigation in Git repositories. [12] Tree-sitter uses a GLR parser, a type of LR parser. [13] [14] [12] Tree-sitter was originally developed by GitHub for use in the Atom text editor, where it was first ...