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The data is weighted and integrated and a confidence score is calculated for all protein interactions. Results of the various computational predictions can be inspected from different designated views. There are two modes of STRING: Protein-mode and COG-mode.
Protein-protein and other molecular interactions Database of Interacting Proteins: Univ. of California: Protein-protein and other molecular interactions IntAct [21] EMBL-EBI: open-source database for molecular interactions Protein-protein and other molecular interactions String: an open source molecular interaction database to study ...
English: A table of the protein interactions of the ZFP62 protein in humans. This data was compiled from the STRING Database. This data was compiled from the STRING Database. Interacting proteins are organized by highest to lowest scores, from 0.769 to 0.477 respectively.
For example, the primary database IntAct has 572,063 interactions, [64] the meta-database APID has 678,000 interactions, [65] and the predictive database STRING has 25,914,693 interactions. [66] However, it is important to note that some of the interactions in the STRING database are only predicted by computational methods such as Genomic ...
The Database of Interacting Proteins (DIP) is a biological database which catalogs experimentally determined interactions between proteins. [ 2 ] [ 3 ] It combines information from a variety of sources to create a single, consistent set of protein–protein interactions.
The Biological General Repository for Interaction Datasets (BioGRID) is a curated biological database of protein-protein interactions, genetic interactions, chemical interactions, and post-translational modifications created in 2003 (originally referred to as simply the General Repository for Interaction Datasets (GRID) [2] by Mike Tyers, Bobby-Joe Breitkreutz, and Chris Stark at the Lunenfeld ...
The ConsensusPathDB is a molecular functional interaction database, integrating information on protein interactions, genetic interactions signaling, metabolism, gene regulation, and drug-target interactions in humans. ConsensusPathDB currently (release 30) includes such interactions from 32 databases. [1]
As of 2008, only about <0.3% of all estimated interactions among human proteins has been identified, [9] although in recent years there has been exponential growth in discovery – as of 2015, [10] over 210 000 unique human positive protein–protein interactions are currently catalogued, and bioGRID database contains almost 750 000 literature ...