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  2. Arc diagram - Wikipedia

    en.wikipedia.org/wiki/Arc_diagram

    The Farey diagram of any set of rational numbers is a planar graph, and the Farey diagram of the set of all rational numbers forms a tessellation of the hyperbolic plane by ideal triangles. [11] Arc diagrams or circuit diagrams are commonly used in studying folded biopolymers such as proteins and nucleic acids (DNAs, RNAs). Biopolymers are ...

  3. Adjacency matrix - Wikipedia

    en.wikipedia.org/wiki/Adjacency_matrix

    The same concept can be extended to multigraphs and graphs with loops by storing the number of edges between each two vertices in the corresponding matrix element, and by allowing nonzero diagonal elements. Loops may be counted either once (as a single edge) or twice (as two vertex-edge incidences), as long as a consistent convention is followed.

  4. Edge and vertex spaces - Wikipedia

    en.wikipedia.org/wiki/Edge_and_vertex_spaces

    The edge space is the /-vector space freely generated by the edge set E. The dimension of the vertex space is thus the number of vertices of the graph, while the dimension of the edge space is the number of edges. These definitions can be made more explicit.

  5. Graph theory - Wikipedia

    en.wikipedia.org/wiki/Graph_theory

    A directed graph with three vertices and four directed edges (the double arrow represents an edge in each direction). A directed graph or digraph is a graph in which edges have orientations. In one restricted but very common sense of the term, [5] a directed graph is an ordered pair = (,) comprising:

  6. Directed graph - Wikipedia

    en.wikipedia.org/wiki/Directed_graph

    A directed graph is weakly connected (or just connected [9]) if the undirected underlying graph obtained by replacing all directed edges of the graph with undirected edges is a connected graph. A directed graph is strongly connected or strong if it contains a directed path from x to y (and from y to x) for every pair of vertices (x, y).

  7. Graph (discrete mathematics) - Wikipedia

    en.wikipedia.org/wiki/Graph_(discrete_mathematics)

    A cycle graph or circular graph of order n ≥ 3 is a graph in which the vertices can be listed in an order v 1, v 2, …, v n such that the edges are the {v i, v i+1} where i = 1, 2, …, n − 1, plus the edge {v n, v 1}. Cycle graphs can be characterized as connected graphs in which the degree of all vertices is 2.

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  9. Edge (geometry) - Wikipedia

    en.wikipedia.org/wiki/Edge_(geometry)

    In geometry, an edge is a particular type of line segment joining two vertices in a polygon, polyhedron, or higher-dimensional polytope. [1] In a polygon, an edge is a line segment on the boundary, [2] and is often called a polygon side. In a polyhedron or more generally a polytope, an edge is a line segment where two faces (or polyhedron sides ...