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Gestalt pattern matching. Gestalt pattern matching, [1] also Ratcliff/Obershelp pattern recognition, [2] is a string-matching algorithm for determining the similarity of two strings. It was developed in 1983 by John W. Ratcliff and John A. Obershelp and published in the Dr. Dobb's Journal in July 1988. [2]
fastqp Simple FASTQ quality assessment using Python. Kraken: [9] A set of tools for quality control and analysis of high-throughput sequence data. HTSeq [10] The Python script htseq-qa takes a file with sequencing reads (either raw or aligned reads) and produces a PDF file with useful plots to assess the technical quality of a run.
Modular PDF software. Solid Converter PDF: Proprietary: Yes Yes Yes PDF to Word, Excel, HTML and Text; supports passwords, text editing, and batch conversion. SWFTools: GNU GPL: Yes Yes Yes Yes SWF conversion and manipulation suite containing a standalone PDF to SWF converter along with a Python gfx API (requires Xpdf).
Proprietary. AnalyzerPro is a vendor-independent software application from SpectralWorks for processing mass spectrometry data. It can process both GC-MS and LC-MS data using qualitative and quantitative data processing and is used in metabolomics with MatrixAnalyzer for the comparison of multiple data sets.
Orange is an open-source software package released under GPL and hosted on GitHub.Versions up to 3.0 include core components in C++ with wrappers in Python.From version 3.0 onwards, Orange uses common Python open-source libraries for scientific computing, such as numpy, scipy and scikit-learn, while its graphical user interface operates within the cross-platform Qt framework.
DEAP (software) Distributed Evolutionary Algorithms in Python (DEAP) is an evolutionary computation framework for rapid prototyping and testing of ideas. [2][3][4] It incorporates the data structures and tools required to implement most common evolutionary computation techniques such as genetic algorithm, genetic programming, evolution ...
A regular expression (shortened as regex or regexp), [1] sometimes referred to as rational expression, [2][3] is a sequence of characters that specifies a match pattern in text. Usually such patterns are used by string-searching algorithms for "find" or "find and replace" operations on strings, or for input validation.
eric (software) eric is a free integrated development environment (IDE) used for computer programming. Since it is a full featured IDE, it provides by default all necessary tools needed for the writing of code and for the professional management of a software project. eric is written in the programming language Python and its primary use is for ...