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SABIO-RK (System for the Analysis of Biochemical Pathways - Reaction Kinetics) is a web-accessible database storing information about biochemical reactions and their kinetic properties. SABIO-RK comprises a reaction-oriented representation of quantitative information on reaction dynamics based on a given selected publication.
Chemical kinetics, also known as reaction kinetics, is the branch of physical chemistry that is concerned with understanding the rates of chemical reactions. It is different from chemical thermodynamics , which deals with the direction in which a reaction occurs but in itself tells nothing about its rate.
In enzyme kinetics, the reaction rate is measured and the effects of varying the conditions of the reaction are investigated. Studying an enzyme's kinetics in this way can reveal the catalytic mechanism of this enzyme, its role in metabolism , how its activity is controlled, and how a drug or a modifier ( inhibitor or activator ) might affect ...
Open Reaction Database ORD consortium Organic reactions machine-readable reaction schemes "ORD" [8] 2,000,000 OrgSyn Organic Syntheses: Organic Syntheses, Inc. Reliable chemical reactions Searchable experimental procedures Peer reviewed "OrgSyn search". PDB PDBe Protein Data Bank in Europe EMBL-EBI: has some chemicals as well as proteins "PDBe".
SABIO-Reaction Kinetics Database; ... Table of standard reduction potentials for half-reactions important in biochemistry; Toxin and Toxin-Target Database;
CHEMKIN is a proprietary software tool for solving complex chemical kinetics problems. It is used worldwide in the combustion, [1] chemical processing, [2] microelectronics [citation needed] and automotive [citation needed] industries, and also in atmospheric science. [3]
Regardless, this reaction is still very useful as it has notably fast reaction kinetics. [ 36 ] The applications of this reaction include labeling proteins containing serine as the first residue: the serine is oxidized to aldehyde with NaIO 4 and then converted to nitrone with p-methoxybenzenethiol, N-methylhydroxylamine and p-ansidine, and ...
Data from reaction progress kinetics experiments are also often presented via a rate (v) vs. substrate concentration ([S]) plot. This requires obtaining and combining both the [S] vs. t and the v vs. t plots described above (note that one may be obtained from the other by simple differentiation or integration