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Pyrite disks or spindles are sometimes mistaken for fossils of sand dollars or other forms (see marcasite). Cracks, bumps, gas bubbles, and such can be difficult to distinguish from true fossils. Specimens that cannot be attributed with certainty to either fossils or pseudofossils are treated as dubiofossils. Debates on whether specific forms ...
High Performance MD, highly flexible, Python scriptable Free open source MIT: OpenMM: Orac: No No Yes Yes No Yes No Yes No Molecular dynamics simulation program to explore free energy surfaces in biomolecular systems at the atomic level Free open source: Orac download page: NAMD + VMD: Yes Yes Yes Yes No Yes I Yes Yes Fast, parallel MD, CUDA
The term dubiofossil is a portmanteau word used in geology and paleontology for a problematic structure that looks like a fossil but has an uncertain biologic origin. From Latin dubius, and English fossil, the word has been used mainly for remains found in rocks dating from the early history of the Earth (Precambrian rocks), but it is also applicable in other settings such as problematic ...
Python. The use of the triple-quotes to comment-out lines of source, does not actually form a comment. [19] The enclosed text becomes a string literal, which Python usually ignores (except when it is the first statement in the body of a module, class or function; see docstring). Elixir
Most Python code runs well on PyPy except for code that depends on CPython extensions, which either does not work or incurs some overhead when run in PyPy. PyPy itself is built using a technique known as meta-tracing, which is a mostly automatic transformation that takes an interpreter as input and produces a tracing just-in-time compiler as ...
Python sets are very much like mathematical sets, and support operations like set intersection and union. Python also features a frozenset class for immutable sets, see Collection types. Dictionaries (class dict) are mutable mappings tying keys and corresponding values. Python has special syntax to create dictionaries ({key: value})
This list of protein structure prediction software summarizes notable used software tools in protein structure prediction, including homology modeling, protein threading, ab initio methods, secondary structure prediction, and transmembrane helix and signal peptide prediction.
Python: python.org: Python Software Foundation License: Python has two major implementations, the built in re and the regex library. Ruby: ruby-doc.org: GNU Library General Public License: Ruby 1.8, Ruby 1.9, and Ruby 2.0 and later versions use different engines; Ruby 1.9 integrates Oniguruma, Ruby 2.0 and later integrate Onigmo, a fork from ...