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  2. FlowJo - Wikipedia

    en.wikipedia.org/wiki/FlowJo

    FlowJo is a software package for analyzing flow cytometry data. Files produced by modern flow cytometers are written in the Flow Cytometry Standard [ 1 ] format with an .fcs file extension. FlowJo will import and analyze cytometry data regardless of which flow cytometer is used to collect the data.

  3. Flow Cytometry Standard - Wikipedia

    en.wikipedia.org/wiki/Flow_Cytometry_Standard

    Since then, FCS became the standard file format supported by all flow cytometry software and hardware vendors. FCS is a binary file format with three main segments: a text segment containing meta data in keyword/value pairs structures, a data segment usually containing a matrix of detected expression values (so called list mode format), and a ...

  4. Flow cytometry bioinformatics - Wikipedia

    en.wikipedia.org/wiki/Flow_cytometry_bioinformatics

    ISAC is considering replacing FCS with a flow cytometry specific version of the Network Common Data Form (netCDF) file format. [64] netCDF is a set of freely available software libraries and machine independent data formats that support the creation, access, and sharing of array-oriented scientific data. In 2008, ISAC drafted the first version ...

  5. List of open-source bioinformatics software - Wikipedia

    en.wikipedia.org/wiki/List_of_open-source...

    Software Description Platform License Developer .NET Bio Language-neutral toolkit built using the Microsoft 4.0 .NET Framework to help developers, researchers, and scientists .NET Framework: Apache: Collaborative project AMPHORA: Metagenomics analysis software Linux: GPL: Jonathan Eisen: Anduril: Component-based workflow framework for data analysis

  6. Mass cytometry - Wikipedia

    en.wikipedia.org/wiki/Mass_cytometry

    These data are formatted as FCS files, which are compatible with traditional flow cytometry software. Due to the high-dimensional nature of mass cytometry data, novel data analysis tools have been developed as well. [14] Imaging Mass Cytometry data analysis has its specificity due to different nature of data obtained. In terms of data analysis ...

  7. List of mass spectrometry software - Wikipedia

    en.wikipedia.org/wiki/List_of_mass_spectrometry...

    A proteomics analysis software with modules for translational proteomics, glycoproteomics, and biopharma analysis. It includes comprehensive quantitation of thousands of proteins across hundreds of samples using DDA, DIA, PRM or SRM with fully integrated statistics and biological interpretation.

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