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Tulip is an information visualization framework dedicated to the analysis and visualization of relational data. Tulip aims to provide the developer with a complete library, supporting the design of interactive information visualization applications for relational data that can be tailored to the problems being addressed.
In natural language processing, Entity Linking, also referred to as named-entity disambiguation (NED), named-entity recognition and disambiguation (NERD), named-entity normalization (NEN), [1] or Concept Recognition, is the task of assigning a unique identity to entities (such as famous individuals, locations, or companies) mentioned in text.
RN tools generally have associated analytical capabilities that enable evaluation of collaboration and cross-disciplinary research/scholarly activity, especially over time. RN tools and research profiling systems can help researchers gain recognition. Active promotion of scholarship is an aspect of the publication cycle.
Gephi has been used in a number of research projects in academia, journalism and elsewhere, for instance in visualizing the global connectivity of New York Times content [17] and examining Twitter network traffic during social unrest [18] [19] along with more traditional network analysis topics. [20]
Graph-tool is a python module for efficient analysis of graphs. Its core data structures and algorithms are implemented in C++, with heavy use of Template metaprogramming, based on the Boost Graph Library. It contains a comprehensive list of algorithms. R: Social network analysis within the versatile and popular R environment
Graph-tool can be used to work with very large graphs [clarification needed] in a variety of contexts, including simulation of cellular tissue, [2] data mining, [3] [4] analysis of social networks, [5] [6] analysis of P2P systems, [7] large-scale modeling of agent-based systems, [8] study of academic Genealogy trees, [9] theoretical assessment ...
fast real-time large-dataset plotting and viewing tool with basic data analysis functionality AIDA: LGPL: Yes 2001: October 2003 / 3.2.1: Open interfaces and formats for particle physics data processing Algebrator: GUI: Proprietary: No 1999: 2009 / 4.2: Linux, Mac OS X, Sugar, Windows: 2D graphs Archim: drawing 2D and 3D graphs: freeware: No ...
To identify differentially expressed genes between experiments, StringTie's output can be processed either by the Cuffdiff or Ballgown programs. TransComb a genome-guided transcriptome assembly via combing junctions in splicing graphs. Traph A tool for transcript identification and quantification with RNA-Seq.
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