Search results
Results From The WOW.Com Content Network
In mathematics, a Euclidean distance matrix is an n×n matrix representing the spacing of a set of n points in Euclidean space. For points x 1 , x 2 , … , x n {\displaystyle x_{1},x_{2},\ldots ,x_{n}} in k -dimensional space ℝ k , the elements of their Euclidean distance matrix A are given by squares of distances between them.
In general, a distance matrix is a weighted adjacency matrix of some graph. In a network, a directed graph with weights assigned to the arcs, the distance between two nodes of the network can be defined as the minimum of the sums of the weights on the shortest paths joining the two nodes (where the number of steps in the path is bounded). [2]
It can be extended to infinite-dimensional vector spaces as the L 2 norm or L 2 distance. [25] The Euclidean distance gives Euclidean space the structure of a topological space, the Euclidean topology, with the open balls (subsets of points at less than a given distance from a given point) as its neighborhoods. [26]
Given the Cayley-Menger relations as explained above, the following section will bring forth two algorithms to decide whether a given matrix is a distance matrix corresponding to a Euclidean point set. The first algorithm will do so when given a matrix AND the dimension, , via a geometric constraint solving algorithm.
A metric space M is bounded if there is an r such that no pair of points in M is more than distance r apart. [b] The least such r is called the diameter of M. The space M is called precompact or totally bounded if for every r > 0 there is a finite cover of M by open balls of radius r. Every totally bounded space is bounded.
A Euclidean distance matrix is a particular example of Euclidean random matrix with either f(r i - r j) = |r i - r j | 2 or f(r i - r j) = |r i - r j |. [ 2 ] For example, in many biological networks, the strength of interaction between two nodes depends on the physical proximity of those nodes.
The distance matrix can come from a number of different sources, including measured distance (for example from immunological studies) or morphometric analysis, various pairwise distance formulae (such as euclidean distance) applied to discrete morphological characters, or genetic distance from sequence, restriction fragment, or allozyme data.
Then the Euclidean distance over the end-points of any two vectors is a proper metric which gives the same ordering as the cosine distance (a monotonic transformation of Euclidean distance; see below) for any comparison of vectors, and furthermore avoids the potentially expensive trigonometric operations required to yield a proper metric.