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FlyBase: genome of the model organism Drosophila melanogaster; Gene Disease Database; Gene Expression Omnibus (GEO [9]): a public functional genomics data repository from the U.S. National Cancer Institute (NCI), which supports array- and sequence-based data. Tools for querying and downloading gene expression profiles are provided.
Genoinformatics refers to genome and chromosome dynamics, quantitative biology and modeling, molecular and cellular pathologies. [7] Genome informatics also includes the field of genome design. There still a lot more we can do and develop in Genome Informatics. Find a potential disease, searching a solution for a disease, or proving why people ...
BioMart is a freely available, open-source, federated database system that provides unified access to disparate, geographically distributed data sources. [8] BioMart allows databases hosted on different servers to be presented seamlessly to users, facilitating collaborative projects.
It is divided in two parts: the Core genome, a set of genes common to all the genomes under study (often housekeeping genes vital for survival), and the Dispensable/Flexible genome: a set of genes not present in all but one or some genomes under study. A bioinformatics tool BPGA can be used to characterize the Pan Genome of bacterial species. [32]
Relational database concepts of computer science and Information retrieval concepts of digital libraries are important for understanding biological databases. Biological database design, development, and long-term management is a core area of the discipline of bioinformatics. [3]
Sergey Koren is an American bioinformatician who is an associate investigator in the genome informatics section at the National Human Genome Research Institute.. After completing his M.S., Koren joined the J. Craig Venter Institute (JCVI) as a bioinformatics engineer under the supervision of Granger Sutton. [1]
Mouse Genome Informatics (MGI) is a free, online database and bioinformatics resource hosted by The Jackson Laboratory, with funding by the National Human Genome Research Institute (NHGRI), the National Cancer Institute (NCI), and the Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD). [1]
The Viral Bioinformatics Resource Center (VBRC) is an online resource providing access to a database of curated viral genomes and a variety of tools for bioinformatic genome analysis. [1] This resource was one of eight BRCs ( Bioinformatics Resource Centers ) funded by NIAID with the goal of promoting research against emerging and re-emerging ...