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A latent infection results when the provirus is transcriptionally silent rather than active. A latent infection may become productive in response to changes in the host's environmental conditions or health; the provirus may be activated and begin transcription of its viral genome. This can result in the destruction of its host cell because the ...
Identical LTR sequences at either end of a retrotransposon. A long terminal repeat (LTR) is a pair of identical sequences of DNA, several hundred base pairs long, which occur in eukaryotic genomes on either end of a series of genes or pseudogenes that form a retrotransposon or an endogenous retrovirus or a retroviral provirus.
For this reason, an integrated provirus is a necessary for permanent and an effective expression of retroviral genes. [10] This DNA can be incorporated into host genome as a provirus that can be passed on to progeny cells. The retrovirus DNA is inserted at random into the host genome. Because of this, it can be inserted into oncogenes. In this ...
Provirus silencing, or proviral silencing, is the repression of expression of proviral genes in cells. A provirus is a viral DNA that has been incorporated into the chromosome of a host cell, often by retroviruses such as HIV. [1] Endogenous retroviruses are always in the provirus state in the host cell and replicate through reverse ...
An endogenous viral element (EVE) is a DNA sequence derived from a virus, and present within the germline of a non-viral organism. EVEs may be entire viral genomes , or fragments of viral genomes. They arise when a viral DNA sequence becomes integrated into the genome of a germ cell that goes on to
The main function of IN is to insert the viral DNA into the host chromosomal DNA, an essential step for HIV replication. Integration is a "point of no return" for the cell, which becomes a permanent carrier of the viral genome (provirus). Integration is in part responsible for the persistence of retroviral infections. [10]
The viral DNA is then translocated into the nucleus where one strand of the retroviral genome is put into the chromosomal DNA by the help of the virion integrase. At this point the retrovirus is referred to as provirus. Once in the chromosomal DNA, the provirus is transcribed by the cellular RNA polymerase II.
Virome refers to the assemblage of viruses [1] [2] that is often investigated and described by metagenomic sequencing of viral nucleic acids [3] that are found associated with a particular ecosystem, organism or holobiont. The word is frequently used to describe environmental viral shotgun metagenomes.