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  2. ChemDraw - Wikipedia

    en.wikipedia.org/wiki/ChemDraw

    ChemDraw is a molecule editor first developed in 1985 by Selena "Sally" Evans, her husband David A. Evans, and Stewart Rubenstein [1] [2] (later by the cheminformatics company CambridgeSoft). The company was sold to PerkinElmer in 2011. [ 3 ]

  3. XDrawChem - Wikipedia

    en.wikipedia.org/wiki/XDrawChem

    Detection of structures, text, and arrows, and their automatic placement; Can automatically draw rings and other structures - has all standard amino acids and nucleic acids in a built-in library; Retrieval of structures from a network database based on CAS number, formula, or name; Retrieval of information on a molecule based on a drawing

  4. List of cheminformatics toolkits - Wikipedia

    en.wikipedia.org/wiki/List_of_Cheminformatics...

    Cheminformatics toolkits are notable software development kits that allow cheminformaticians to develop custom computer applications for use in virtual screening, chemical database mining, and structure-activity studies. [1] [2] Toolkits are often used for experimentation with new methodologies. Their most important functions deal with the ...

  5. Molecule editor - Wikipedia

    en.wikipedia.org/wiki/Molecule_editor

    A notable molecule editor is a computer program for creating and modifying representations of chemical structures. Molecule editors can manipulate chemical structure representations in either a simulated two-dimensional space or three-dimensional space , via 2D computer graphics or 3D computer graphics , respectively.

  6. Comparison of software for molecular mechanics modeling

    en.wikipedia.org/wiki/Comparison_of_software_for...

    (I) Free energy perturbation (FEP) simulations, (II) empirical valence bond (EVB), calculations of reaction free energies, (III) linear interaction energy (LIE) calculations of receptor-ligand binding affinities Free open source GNU GPLv2 or later Q: QuantumATK: Yes Yes Yes Yes Yes No Yes Yes Yes Complete atomistic modeling platform for ...

  7. JME Molecule Editor - Wikipedia

    en.wikipedia.org/wiki/JME_Molecule_Editor

    The JME Molecule Editor is a molecule editor Java applet with which users make and edit drawings of molecules and reactions (including generating substructure queries), and can display molecules within an HTML page. [1] The editor can generate Daylight simplified molecular-input line-entry system (SMILES) or MDL Molfiles of the created structures.

  8. List of computer-assisted organic synthesis software - Wikipedia

    en.wikipedia.org/wiki/List_of_computer-assisted...

    Computer-assisted organic synthesis software is a type of application software used in organic chemistry in tandem with computational chemistry to help facilitate the tasks of designing, predicting, and producing chemical reactions. CAOS aims to identify a series of chemical reactions which, from a starting compound, can produce a desired molecule.

  9. Optical chemical structure recognition - Wikipedia

    en.wikipedia.org/wiki/Optical_chemical_structure...

    Optical chemical structure recognition (OCSR) is the translation of images that depict chemical structure information into machine-readable formats. [1] It addresses the challenge of translating chemical structures from graphical representations into their corresponding chemical formulas.