Search results
Results From The WOW.Com Content Network
Uses adaptative seeds and copes more efficiently with repeat-rich sequences (e.g. genomes). For example: it can align reads to genomes without repeat-masking, without becoming overwhelmed by repetitive hits. Yes Yes Yes Yes Free, GPL [46] 2011 MAQ Ungapped alignment that takes into account quality scores for each base. Free, GPL: mrFAST, mrsFAST
This page is a subsection of the list of sequence alignment software. Multiple alignment visualization tools typically serve four purposes: Aid general understanding of large-scale DNA or protein alignments; Visualize alignments for figures and publication; Manually edit and curate automatically generated alignments; Analysis in depth
The tz database partitions the world into regions where local clocks all show the same time. This map was made by combining version 2023d with OpenStreetMap data, using open source software. [1] This is a list of time zones from release 2025a of the tz database. [2]
Astropy, a library of Python tools for astronomy and astrophysics. Biopython, a Python molecular biology suite; Gensim, a library for natural language processing, including unsupervised topic modeling and information retrieval; graph-tool, a Python module for manipulation and statistical analysis of graphs.
In computing, Bash (short for "Bourne Again SHell,") [6] is an interactive command interpreter and command programming language developed for UNIX-like operating systems. [7] Created in 1989 [ 8 ] by Brian Fox for the GNU Project , it is supported by the Free Software Foundation and designed as a 100% free alternative for the Bourne shell ( sh ...
In the lower right we can see a terminal emulator running a Unix shell, in which the user can type commands as if they were sitting at a terminal. In computing , a shell is a computer program that exposes an operating system 's services to a human user or other programs.
TM-score based protein structure alignment: Cα: Pair: nil: server and download: Y. Zhang & J. Skolnick: 2005 mTM-align Multiple protein structure alignment based on TM-align Cα Multi No server and download: R. Dong, Z. Peng, Y. Zhang & J. Yang 2018 VAST Vector Alignment Search Tool: SSE: Pair: nil: server: S. Bryant: 1996 PrISM Protein ...
The reported time is a time used by both seq and wc -l added up. Format of the output can be adjusted using TIMEFORMAT variable. The time is not a builtin, but a special keyword, and can't be treated as a function or command. It also ignores pipeline redirections (even when executed as time -p, unless entire Bash is run in "POSIX mode").