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Plant Genome DataBase Japan [18] (PGDBj) is a website that contains information related to genomes of model and crop plants from databases. It has three main components: ortholog db, DNA marker and linkage map db, and plant resource db, where multiple plant resources accumulated by different institutes are integrated.
Crop plant: 714–758 Mbp: 27,421: 2013 [38] Chenopodium quinoa: Chenopodiaceae: Crop plant 1.39–1.50 Gb 44,776 2017 [39] 3,486 scaffolds, scaffold N50 of 3.84 Mb, 90% of the assembled genome is contained in 439 scaffolds [39] Amaranthus hypocondriacus: Amaranthaceae: Crop plant 403.9 Mb 23,847 2016 [40] 16 large scaffolds from 16.9 to 38.1 Mb.
The list of organisms by chromosome count describes ploidy or numbers of chromosomes in the cells of various plants, animals, protists, and other living organisms.This number, along with the visual appearance of the chromosome, is known as the karyotype, [1] [2] [3] and can be found by looking at the chromosomes through a microscope.
The main objective of the Ensembl Genomes database is to complement the main Ensembl database by introducing five additional web pages to include genome data for bacteria, fungi, invertebrate metazoa, plants, and protists. [4] For each of the domains, the Ensembl tools are available for manipulation, analysis and visualization of genome data ...
It also includes GenBank sequences for Animals, Plants and Protists, accessible via BLAST queries. [ 10 ] Virus Variation (ViV): It is a specific resource of sequence data processing pipelines and analysis tools for display and retrieval of sequences from several viral groups such as influenza virus , ebolavirus , MERS coronavirus or Zika virus .
Most eukaryotes are diploid, meaning that there are two of each chromosome in the nucleus but the 'genome' refers to only one copy of each chromosome. Some eukaryotes have distinctive sex chromosomes, such as the X and Y chromosomes of mammals, so the technical definition of the genome must include both copies of the sex chromosomes.
An image of multiple chromosomes, taken from many cells. Plant genetics is the study of genes, genetic variation, and heredity specifically in plants. [1] [2] It is generally considered a field of biology and botany, but intersects frequently with many other life sciences and is strongly linked with the study of information systems.
The 1000 Plant Transcriptomes Initiative (1KP) was an international research effort to establish the most detailed catalogue of genetic variation in plants. It was announced in 2008 and headed by Gane Ka-Shu Wong and Michael Deyholos of the University of Alberta .