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  2. Mutation rate - Wikipedia

    en.wikipedia.org/wiki/Mutation_rate

    The human germline mutation rate is approximately 0.5×10 −9 per basepair per year. [1] In genetics, the mutation rate is the frequency of new mutations in a single gene, nucleotide sequence, or organism over time. [2] Mutation rates are not constant and are not limited to a single type of mutation; there are many different types of mutations.

  3. List of Y-STR markers - Wikipedia

    en.wikipedia.org/wiki/List_of_Y-STR_markers

    Mutation rate Links DYS19=14 see DYS394 — — — — DYS385 DYS385 is a multi-copy marker, and includes DYS385a and DYS385b. The order of DYS385a and DYS385b may be reversed, their sequence is referred to as the Kittler order. GAAA 13-18 0.00226 NIST fact sheet: DYS388 ATT 17 0.00022 [5] DYS389

  4. Molecular clock - Wikipedia

    en.wikipedia.org/wiki/Molecular_clock

    The molecular clock is a figurative term for a technique that uses the mutation rate of biomolecules to deduce the time in prehistory when two or more life forms diverged.The biomolecular data used for such calculations are usually nucleotide sequences for DNA, RNA, or amino acid sequences for proteins.

  5. Mutation frequency - Wikipedia

    en.wikipedia.org/wiki/Mutation_frequency

    Mutation frequencies test are cost effective in laboratories [1] however; these two concepts provide vital information in reference to accounting for the emergence of mutations on any given germ line. [2] [3] There are several test utilized in measuring the chances of mutation frequency and rates occurring in a particular gene pool.

  6. Human mitochondrial molecular clock - Wikipedia

    en.wikipedia.org/wiki/Human_mitochondrial...

    Estimates of the mutation rate of human mitochondrial DNA (mtDNA) vary greatly depending on the available data and the method used for estimation. The two main methods of estimation, phylogeny-based methods and pedigree-based methods, have produced mutation rates that differ by almost an order of magnitude. Current research has been focused on ...

  7. Luria–Delbrück experiment - Wikipedia

    en.wikipedia.org/wiki/Luria–Delbrück_experiment

    These factors cause the frequency (r/N t) to vary greatly, even if the number of mutational events (m) is the same. Frequency is not a sufficiently accurate measure of mutation and the mutation rate (m/N t) should always be calculated. The estimation of the mutation rate (μ) is complex.

  8. Models of DNA evolution - Wikipedia

    en.wikipedia.org/wiki/Models_of_DNA_evolution

    The descriptions of rate matrices on this page accurately reflect the relative magnitude of different substitutions, but these rate matrices are not scaled such that a branch length of 1 yields one expected change. This scaling can be accomplished by multiplying every element of the matrix by the same factor, or simply by scaling the branch ...

  9. List of RNA-Seq bioinformatics tools - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA-Seq...

    Results of differential expression analysis can be integrated with ChIP-Seq data to build average tag density profiles and heat maps. The package makes use of several tools open source tools including STAR and DESeq. See also. [72] Chipster is a user-friendly analysis software for high-throughput data. It contains over 350 analysis tools for ...