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The project started in 2008 by Bioversity International, the Global Crop Diversity Trust and the Secretariat of the International Treaty on Plant Genetic Resources for Food and Agriculture, "to create a single information portal to facilitate the access to, and use of, accessions in ex situ gene banks".
Karyotype visualisation in Ensembl Genomes. The key feature of Ensembl Genomes is its graphical interface, which allows users to scroll through a genome and observe the relative location of features such as conceptual annotation (e.g. genes, SNP loci), sequence patterns (e.g. repeats) and experimental data (e.g. sequences and external sequence features mapped onto the genome). [1]
The 1000 Plant Transcriptomes Initiative (1KP) was an international research effort to establish the most detailed catalogue of genetic variation in plants. It was announced in 2008 and headed by Gane Ka-Shu Wong and Michael Deyholos of the University of Alberta .
The gene finder is based on a hidden Markov model (HMM) that is automatically estimated for a new genome. Prokaryotes [8] [9] EuGene: Integrative gene finding: Prokaryotes, Eukaryotes [10] [11] FGENESH: HMM-based gene structure prediction: multiple genes, both chains: Eukaryotes [12] FrameD: Find genes and frameshift in G+C rich prokaryote ...
This is a list of gene families or gene complexes, i.e. sets of genes which are related ancestrally and often serve similar biological functions.These gene families typically encode functionally related proteins, and sometimes the term gene families is a shorthand for the sets of proteins that the genes encode.
Tools for querying and downloading gene expression profiles are provided. Human Protein Atlas (HPA [10]): a public database with expression profiles of human protein coding genes both on mRNA and protein level in tissues, cells, subcellular compartments, and cancer tumors. Legume Information System (LIS): genomic database for the legume family [11]
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Your Favorite Gene is a dynamic web-based research tool provided by Sigma-Aldrich Corp and powered by Ingenuity Systems' Knowledge Base, a repository of biological and chemical networks that is the largest database of its kind. [1] Biological pathways, metabolic pathways, and gene interaction networks are available. [2]